Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01640 ATGGCTTCTTTACAAGTAGATGCCTACATAGAAGGTGGTTTTCCTGTGAGAAAAATGGAGGAACCCAGAATTTCAATCATGGAGGTCATGCAAAATGAAAAGCAGATTGTGGTGGATCCACTTTCATTAAAAGATTCTCCTACTAAACCGGGGTACCTTGACACCACGACGGTGTTGCCAACTATAATCACAACTTCATCAGCCATCATTTTGCACCCTCCACCACTTCAACCTCCAAAGTCAAAGTTCTTAAGCAAGAGTCTCCCAAATTCAGCAAACTCATCACCTAGGTTTGCTTCAGCACTTTCCAAGAAGAAACCAAAAGGTGAGAGCCCGGAATCACAATGCCAAGCAAGTAATATCACCCTTCAGCATTTGCTACAAGAAGTGCATTTAAGGAAGAGCAAATCATGTAATGAAGAAAGAGCATTTGCCCCCTCGGATGAATTTGATCGATGGTTGACTAAACTAAGTGCATTGGATCATGACAACTGGCAACATATTGACAACTTCTCCAAAATTGAAGTTGTCAAAGGAAGTCCCAAGAGTGTTAACCCTAAGCACATGAAAGCTACACATGATGGATTCAAATGCAATGCTCTATGCCTTTATCTACCAGGCTTTGGTGGTAAAGTAAAGCCAGTTAAAGCAAGAAAGGATCAAGAATCAGAAAAGGGTGGTGTAATGTCTAGAACAGTTTCCTTGGAAAATTTTGAGTGTGGTTCATGGGCTTCTGCGGCAATATTTAATGAGATTGAAGGAGAATCCACTAACTCCTACTTTGATCTTCCTATGGAGTTGATCAAATGCAGTGCCAGTGAAGTGTATTCACCAGTTTCTCCATCTTTTGCTTTTGAAAGAGATCTTAAAGGGATTCTCAAGAATGGTTCCTCTAGAGGCAATGTTAGAAAATCAGATGCATCGCCGCGCCATGTTAGGTTTTCTTCATCATCTTCGGCATCACATCCTACCTCTCCAGTATCTTGCATCTCTCCTCGTTTGAGAAAAGCCAGAGAAGATTTTAACGCCTTCTTAGCAGCAGCACAAACTGCATGA 1056 0.4148 MASLQVDAYIEGGFPVRKMEEPRISIMEVMQNEKQIVVDPLSLKDSPTKPGYLDTTTVLPTIITTSSAIILHPPPLQPPKSKFLSKSLPNSANSSPRFASALSKKKPKGESPESQCQASNITLQHLLQEVHLRKSKSCNEERAFAPSDEFDRWLTKLSALDHDNWQHIDNFSKIEVVKGSPKSVNPKHMKATHDGFKCNALCLYLPGFGGKVKPVKARKDQESEKGGVMSRTVSLENFECGSWASAAIFNEIEGESTNSYFDLPMELIKCSASEVYSPVSPSFAFERDLKGILKNGSSRGNVRKSDASPRHVRFSSSSSASHPTSPVSCISPRLRKAREDFNAFLAAAQTA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01640 351 MobiDBLite consensus disorder prediction 311 328 - -
Cca08g01640 351 MobiDBLite consensus disorder prediction 296 329 - -
Cca08g01640 351 MobiDBLite consensus disorder prediction 80 116 - -
Cca08g01640 351 PANTHER - 19 351 - -
Cca08g01640 351 MobiDBLite consensus disorder prediction 83 100 - -
Cca08g01640 351 PANTHER YCF3-INTERACTING PROTEIN 1, CHLOROPLASTIC 19 351 IPR040340 GO:0009535|GO:0048564|GO:0080183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01640 Cca-Chr8 47904447 47905502 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01640 - - gmx:102662703 521.546