Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01638 ATGGCGAAGGAGAGAGAGAAGAAGCTCCACGTGGCCATACTCGGCACCTACGCCGCCGAGATCAAGctcctcctcaccaccctcctcctcctctgcgccgtcgccaccctcctccagttcctcccctcccgcttcaccatctccgcctccgacctccGCGTATGCATCTCCCGCGTCACGCAAACCACCCCCTCAACCTCCAACACCACAACCACAAATGCCACGTcaccatcactaccaccaccaccaccgccaccaccaccaccCACTCTTCCGCCGCCGCCGCCACCCTCCGAGCACCTCCTCCCCAACGGAATCATCAAGCGCGCCTTCAACCCCCACGGCTCCGCCGCCTACAACTTCATCACCATGGGCGCATACCGCGGCGGCCTCAACACCTTCGCCATCATAGGCCTCGCCTCAAAGCCTCTCCATGTCTACGCCAAACCCACCTACCAGTGCGCGTGGGCCTCACTCGCCGGCGACACGCTCGCCACCGCCGCCGGCTACAAGATCCTCCCCGACTGGGGCTACGGCCGCGTCTACACCGTCGTCATCGTGAACTGCACCTTCCCAGCCCCCCTCAACGCCAACAACGCCGGCGGGAAGCTCCTCCTCTCGGCCTCCACCTCCGGCGGCGGCGACGCGGCCCTCAACGCCACCGACACAATGGAGGTCCTCACCGAAGCCCCCAACACCCTGGACACGTCCTTGTTCACTTCAAAGCCCAAGTACGACTACTTATACTGCGGCTCCTCCCTCTACGGGAACCTGAACGCGCAGCGCGTGAGGGAGTGGATCGCGTACCACGTGAAATTCTTCGGCCCTCGCTCGCACTTCGTGATCCACGACGCGGGTGGGGTGCACGCGCAGGTGCTGGAGGTGCTGAAGCCGTGGATGGAGCTCGGGTATGTGACGCTGCAGGACATAAGGGACCAGGAACGCTTCGATGGCTACTACCATAACCAGTTCATGGTGGTTAATGATTGCTTGCATAGGTATAAGTTCATGGCCAAGTGGATGTTCTTCTTTGATGTCGATGAGTTCATCTTTGTTCCTCCCAAGAGTACTGTTAAGTCAGTGCTTGATTCGCTCTCCGAGTATTCTCAGTTCACCATTGAACAGATGCCCATGAGTAGCAAGCTCTGCCTCACCGCTGATTATGGGAAAACATATAGGAAATGGGGGTTTGAGAAGCTGGTGTATAAAGATTCAAAGAAAGGGATTAGAAGGGATCGAAAATATGCAGTGCAACCGAGGAATTTGTTTGCAACTGGGGTTCACATGTCACAGAACCTTGCAGGAAAGACAACTCACAAGACTGAAGGGAAAATAATGTACTACCATTATCATGGAACCATAGCTGAAAGAAGAGAATCGTGTAAAATGCTTATAAATTCAACACAAATCACGTATGACAAGACCCCTTATGTGTTGGACACCACCATGAGGGACATTGCTGGTGTGATCAAGAAATTTGAGCTCAAGATGATTGGAGATAGGCTACAGAAGACACGGCAATGA 1524 0.5013 MAKEREKKLHVAILGTYAAEIKLLLTTLLLLCAVATLLQFLPSRFTISASDLRVCISRVTQTTPSTSNTTTTNATSPSLPPPPPPPPPPTLPPPPPPSEHLLPNGIIKRAFNPHGSAAYNFITMGAYRGGLNTFAIIGLASKPLHVYAKPTYQCAWASLAGDTLATAAGYKILPDWGYGRVYTVVIVNCTFPAPLNANNAGGKLLLSASTSGGGDAALNATDTMEVLTEAPNTLDTSLFTSKPKYDYLYCGSSLYGNLNAQRVREWIAYHVKFFGPRSHFVIHDAGGVHAQVLEVLKPWMELGYVTLQDIRDQERFDGYYHNQFMVVNDCLHRYKFMAKWMFFFDVDEFIFVPPKSTVKSVLDSLSEYSQFTIEQMPMSSKLCLTADYGKTYRKWGFEKLVYKDSKKGIRRDRKYAVQPRNLFATGVHMSQNLAGKTTHKTEGKIMYYHYHGTIAERRESCKMLINSTQITYDKTPYVLDTTMRDIAGVIKKFELKMIGDRLQKTRQ 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01638 507 MobiDBLite consensus disorder prediction 62 99 - -
Cca08g01638 507 PANTHER GLYCOSYLTRANSFERASE FAMILY 92 PROTEIN 6 503 - -
Cca08g01638 507 Pfam Glycosyltransferase family 92 246 468 IPR008166 -
Cca08g01638 507 PANTHER UNCHARACTERIZED 6 503 - -
Cca08g01638 507 Coils Coil 499 507 - -
Cca08g01638 507 MobiDBLite consensus disorder prediction 76 99 - -
Cca08g01638 507 SUPERFAMILY Formin homology 2 domain (FH2 domain) 84 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01638 Cca-Chr8 47873152 47876552 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01638 K23869 - gmx:100787815 839.721