Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01627 ATGAAACCGTGCGTGGCTGTGGCTCTATTTGCTTTGTGGGTGGTCGTTGTTGATGCACAGTTTGTGGTGAAGAGGAGAAGTATTGCGGTTCTATCACCGCATAAGCTGTGGAGAGAGCGAGACGGCGCCATCGCCAAATTTGGTCTTCCAAACTACCAAGGATTCATCGTTGGTTCTGTTGTTTATCCCAAGAAAGATTCTCTCGGGTGCAAAGTCTTCGATGGTAACATGTTCAACTTTAGGGTTTATCACCCCGCTATTGTTCTCCTTGATCGTGGAGATTGTTATCTTGCCTTGAAGGTTTGGCATGCCCAACAGGCTGGTGCTGCAGCAGTTTTAGTGAGTGACAACCTTGATGAGCCTGTGATAACCTTGGATTTTCCTGAAGTCGATGATAGCCATGATGATGAATTTGGCTTCATAAAGAATATTTCAATTCCATCAGCTCTAATAGAGAAATCCTTTGGCGATATGTTGAAGCAAGCTTTGAATAACGAAGATGAAGTTTTGATAAAAATTGACTGGAGAGATTCAGTACCTCACCATGATCAACGGTTGAGTATGAGTTCTCGAGCAACACGAATGATGAATAAGCGGAGCTCATTTCCACGAATAAACAGTTTTCATCAAGAATTTTAA 639 0.4272 MKPCVAVALFALWVVVVDAQFVVKRRSIAVLSPHKLWRERDGAIAKFGLPNYQGFIVGSVVYPKKDSLGCKVFDGNMFNFRVYHPAIVLLDRGDCYLALKVWHAQQAGAAAVLVSDNLDEPVITLDFPEVDDSHDDEFGFIKNISIPSALIEKSFGDMLKQALNNEDEVLIKIDWRDSVPHHDQRLSMSSRATRMMNKRSSFPRINSFHQEF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01627 212 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 13 188 - -
Cca08g01627 212 Pfam PA domain 58 158 IPR003137 -
Cca08g01627 212 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 13 188 - -
Cca08g01627 212 SUPERFAMILY PA domain 86 167 IPR046450 -
Cca08g01627 212 Gene3D - 18 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01627 Cca-Chr8 47456756 47458562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01627 7 186 Miscellaneous Gene Families AT4G20110 52.778 8.13e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01627 - - pvu:PHAVU_009G243800g 239.58