Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01609 ATGAGTATGAGGAAACTAAGATGGGTAATGGATGGAGGAGGGTTTTGGGATTTGGACATTTCCACTCCCCAAACCCTTGATGGCTTGGCTTGTCCTGTTCCTGGAGACCCTCTTCCATTGGCTCTCTCGCGAGGGACAAGGCTTTCAAGGCCAAGACAGCTCCAATTCATGCACCGTTTCATGCATGCCCCTCTCATTCCCTCCTATTCCCAACCCCAAGGAATCACTCTCCAACGTCTTCTCTCCCTCCCCTTATCCGATAATTGGTTTGTATTTTTATTGGGACAATTCAATTTGCAGAGGTTTGTTTCCTCTGTTAAGAGCAGTGAGGAGAAGCCAAAGGGGTTTTCCTCTTGGCTGAAAACCTATGGGAGACATCTACAGCAGAAGTCCTTGTATGCCCTGGGCTTCTCTTCGGAGTTCCAGTTAGGGCAGGATGATACTTTACTTTTTGGCTTAGATGCATATGACGATACCAATAAGCCTCGTGGGAAGGCGGTCTTTCATCATAGATTTCCACAACATGATCTAACAGTGGAGGCAGTTTATCCTGGTCTTTTTGTTGACAAGACTGGTAATTACTGGGATGTACCATTTTCAATGGCAGTTGATCTTGCTTCTGTGACTACTAGTGATTCTTCCACCGCTTATCATTTGTCTGCACACTACACTTCGGGGACACCCAAGCATTTTGAAAATATTCAAAATCAAAATGATAGAGTACCAAATGATGGTGTACCACCTAGTCTACTTCCAGGCTTGGCCTTCAAAAGTGCCTTTTCTTACAGGAGTAAAGTTGATATTTGGAGAAGTGAAGCTCCGAAGTTGAAATTGGTGCAACCACATGATGTATTTCTTTCAAATCCTCATGTGTCAGCCTCGGGGATTATTGGTGCTGCTGCAACCACTGCATTTGGGGATAATTCAGCAAGAGCACAAGTAGAAGATGGTATACCTGGAATTTTTCTTCAGGCTTCTGGAATAAAGTCCTCCTTTCTAGCAGATATGTTTGCATCCGTCACATTTACAGCCCAGCATGGAAACTTCCAAAGGGATTTTCTAGATCTTACCCGATTTCAGGCCCGGCTGGATTTTCCTTCTGGTTTCAAATTTCTTTCAGGTGCAACCGGTGTAACGCAAGATCTTCTCAATTCTCAAAAGCCCAGCATGGAAGCTGTTCAGGCGATTTTACCCAATGCTACACTATCACTTCAGCAGCAGATTTTTGGTCCTGTCAGTTTTAGAGTTGATTCAGGAATTACAGTTGATCTGAAGAACCCTGATTGGCCTATTGAAGCACATGAACCCGTATTTGCTTTGGAATATGCATTGCAAGTACTTGGTTCAGCCAAAGCAGTTGCATGGTATTGCCCCAAACGCCAAGAGTTTATGGCAGAACTTCGTTTCTATGAGACATAA 1419 0.4412 MSMRKLRWVMDGGGFWDLDISTPQTLDGLACPVPGDPLPLALSRGTRLSRPRQLQFMHRFMHAPLIPSYSQPQGITLQRLLSLPLSDNWFVFLLGQFNLQRFVSSVKSSEEKPKGFSSWLKTYGRHLQQKSLYALGFSSEFQLGQDDTLLFGLDAYDDTNKPRGKAVFHHRFPQHDLTVEAVYPGLFVDKTGNYWDVPFSMAVDLASVTTSDSSTAYHLSAHYTSGTPKHFENIQNQNDRVPNDGVPPSLLPGLAFKSAFSYRSKVDIWRSEAPKLKLVQPHDVFLSNPHVSASGIIGAAATTAFGDNSARAQVEDGIPGIFLQASGIKSSFLADMFASVTFTAQHGNFQRDFLDLTRFQARLDFPSGFKFLSGATGVTQDLLNSQKPSMEAVQAILPNATLSLQQQIFGPVSFRVDSGITVDLKNPDWPIEAHEPVFALEYALQVLGSAKAVAWYCPKRQEFMAELRFYET 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01609 472 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 4, CHLOROPLASTIC 3 472 - -
Cca08g01609 472 PANTHER EXPRESSED PROTEIN 3 472 IPR044160 GO:0034196|GO:0070300|GO:1990052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01609 Cca-Chr8 47226425 47230633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01609 - - ccaj:109803144 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01609 08 47226425 47230633 Cca08g01609 08 47226425 47230633 ECH