Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01606 ATGAGTGATTCCATGACCATGACTGCTACTACTGACCAATGGATGCAGTTCTATCAACAACCCCTTATGGATGGCCATGACCATGACCATGACCATGCTTTGGCACCAAACAAAGAAGGCTTCTTTGATGCAACTTTGATCACAACTAGTACCATGCCATCATCAGAGAGCAATAGCAATAGCATGATGAGCCAATTGACACCCAAGGGTAATGTATCCAAACCAATAAGGAGAAGATCTAGAGCCTCTAAGAGAACCCCAACCACACTCCTCAATGCCAACACCACCAATTTTAGAGCATTAGTACAACAATTCACAGGGTGTCCTAGCACAACCATGTCAACACTAGGGGTCCATAAGGGACCTATCACCTTGAACTTTCAACAAGGAAGTGGACAGAAGAATATTCTCCATAACAACAAAACTAGACTAGTGCTACCATTTAGCACCAGAAGCTACAACAACAACCAGGatcatcatcatcatcatcaAGTGTCTGCACCTCTTCCTTGGCAGAAGCAAGAGGACCACATACCTCAGCAGCAGTTGTTGCATCAGCAGCAACAGAGTGGTTACCCCTTTGATCATTTTGTGAAGAACACTGATTTTCTTCCAAGTTCTGGTAACTCTAGCATGGATGTTTCTGATGGTTTGCTCTATGATAATGATTTTAGTTTGCCTGATCTAACTGGGAATGGCTTCCCCAATGATACCTTTTATAAGAATGAATTATAG 735 0.4177 MSDSMTMTATTDQWMQFYQQPLMDGHDHDHDHALAPNKEGFFDATLITTSTMPSSESNSNSMMSQLTPKGNVSKPIRRRSRASKRTPTTLLNANTTNFRALVQQFTGCPSTTMSTLGVHKGPITLNFQQGSGQKNILHNNKTRLVLPFSTRSYNNNQDHHHHHQVSAPLPWQKQEDHIPQQQLLHQQQQSGYPFDHFVKNTDFLPSSGNSSMDVSDGLLYDNDFSLPDLTGNGFPNDTFYKNEL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01606 244 MobiDBLite consensus disorder prediction 52 85 - -
Cca08g01606 244 PANTHER VQ MOTIF-CONTAINING PROTEIN 4 237 IPR039609 -
Cca08g01606 244 MobiDBLite consensus disorder prediction 52 71 - -
Cca08g01606 244 Pfam VQ motif 85 111 IPR008889 -
Cca08g01606 244 PANTHER VQ MOTIF PROTEIN 4 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01606 Cca-Chr8 47196971 47198031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01606 - - pvu:PHAVU_009G241900g 282.722