Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01513 ATGAAGACAGCAAAAGAATGGCGCCCAGGCATGGGCGATGTGCAGATCTTGCCTGGGTCTCGTCATCGTCCCCCAATGAAGAAGCCTATGTGGATTATTTTCTTGGTTTTATTTGTGTGCGTGTTTCTAATATTTGCTTATATCTACCCGCCGAAAAGCAGTTCAACTTGCTACATCTTCTCAAATGGAAGGTGCCAGTCAATTGCTGATTGGCTTCCACCTGTTCCTGCAAGGGAATATACAGATGATGAGATTGCATCACGTGCTGTTATTAGAGATATTTTGAATGCACCACCAATTCGTTCAAAGAATCCAAAAGTTGCCTTCATGTTTTTGACTCCTGGTTCTCTACCATTTGAAAAATTGTGGGATAAATTTTTCCAAGGACATGAAGGGAAATTCTCTGTTTATGTGCATGCATCTAGGACTAAACCAGTTCATGTGAGCCGATATTTTGTTAATCGGGATATACGCAGTGATCAGGTGGTGTGGGGTAAAATATCTATGGTTGATGCAGAACGGCGACTGTTGGCAAATGCTTTACAAGATCCTGATAACCAGCAATTTGTTTTACTTTCTGATAGCTGTGTGCCGTTGTATACTTTTGACTATATTTTTGATTATCTGATGTATACAAATATCAGCTTCGTCGACTGCTTTAAGGATCCTGGTCCTCATGGCAATGGCAGGTATTCAGAACGGATGTTACCTGAAGTTGAGATGAAGGACTTTAGAAAGGGTGCACAGTGGTTTTCACTGAAGCGGCAACATGCTATTATAGTTATGGCTGACAATCTGTATTACTCAAAATTTCGGGCTTACTGTCAGCCTGGTTTGGATGGGAAAAATTGCATTGCAGATGAGCATTACTTACCTACCTTCTTCCAGATTGTTGATCCTGGTGGAATTTCGAACTGGTCAGTAACTCATGTTGACTGGTCTGAGAGAAAATGGCATCCAAAATCATATAGGGTCCAGGATGTTACGTCTGAGCTTTTGAAGAATATTACGTCCATTGATGTTAGTGTGCACGTCACCAGTGATGAGAAGAGACAAGTACAAAAGTGGCCTTGCTTATGGAATGGGTTTCAGAAGCCATGTTATCTATTTGCTAGGAAATTCACTCCTGGAACACTGGACGGTTTGTTGCAACTTTTTTCTAATTACTCATCACCTTAA 1179 0.4114 MKTAKEWRPGMGDVQILPGSRHRPPMKKPMWIIFLVLFVCVFLIFAYIYPPKSSSTCYIFSNGRCQSIADWLPPVPAREYTDDEIASRAVIRDILNAPPIRSKNPKVAFMFLTPGSLPFEKLWDKFFQGHEGKFSVYVHASRTKPVHVSRYFVNRDIRSDQVVWGKISMVDAERRLLANALQDPDNQQFVLLSDSCVPLYTFDYIFDYLMYTNISFVDCFKDPGPHGNGRYSERMLPEVEMKDFRKGAQWFSLKRQHAIIVMADNLYYSKFRAYCQPGLDGKNCIADEHYLPTFFQIVDPGGISNWSVTHVDWSERKWHPKSYRVQDVTSELLKNITSIDVSVHVTSDEKRQVQKWPCLWNGFQKPCYLFARKFTPGTLDGLLQLFSNYSSP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01513 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 391 IPR044174 GO:0016757
Cca08g01513 392 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 391 - -
Cca08g01513 392 Pfam Core-2/I-Branching enzyme 107 336 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01513 Cca-Chr8 44545240 44553866 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01513 - - gmx:100817202 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01513 08 44545240 44553866 Cca08g01513 08 44545240 44553866 ECH