Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01512 ATGGCATTTGCATATGAACCATTGCATCTTCTATTGTTGTTATACTTCTCAACATGTTTTTTGTCATCAACTAGCACCACTTCATCTGTTAAACCTCAGAGACTAGTCTCAAAACTAATTCACCCTGGATCAGTTCACCACCCTCACTACAAGCCAAATGAAACAACCAAAGACAGAATGGAACTTGATGTGCAACACTCAGCTACACGTTTAGCCTACATAAAAGCAAGGATAGAAAATTCTTTGGTCTCTAATGAGTACACAGCTAGTGCTTTTCCCTCCTCAACAGGTAGAACAATTCTGGCCAATATCTCAATAGGCCAACCCCCCACGCCACAGCTAGTCATCATGGACACTGCCAGTGACATCTTGTGGGTCATGTGTGCCCCTTGCTCAAACTGTGATCACCACTCAGGTCAACTCTTTGACCCCTCAAAGTCTTCCACCTATTCCCCACTATGCAACACACCCTGTGACTTCAAGGGCTGCAAATGTGACCCTTTACCCTTCAGGATCTCTTATGTAGATAGCTCCTCAGCTTCAGGAACATATGGCCATGACATGGTTCTCTTTGAGACAACTGATGAAGGTACCTCTCAGATGTGGGGTGTGCTATTTGGATGTGGCCACAACATTGGATACAATAGGGATCCAGGGTACAATGGAATACTAGGACTAAACTATGCACCTTCATCTTTGGCAACACAAATTGGCCAAGGGTTCTCTTACTGCATAGGCAACCTGGCTGACCAATATTACAGTTACAACCAATTGATATTAGGTGAAGGGGCAGATCTTGAAGGCTATTCCACCCCTTTTCAAGTGCATTATGGCTTTTACTATGTCACCATGGAAGGCATAAGTGTAGGGGAAAGGAGGCTTGACATTGCTCCAGAAACTTTTGAGATTAAAGAGGATGGCACAGGTGGAGCCATCATTGACACAGGGTGCACCCTCACCTATTTAGTTGATGGTGTGCATGAGTTACTATACAGAGAAGTTAGAAATCTCCTTGGTAAGTCCTTTAGACAAGCTATATTTGAGAACACACCGTGGATGCTGTGCTATTATGGCAGTATAAGTAGAGATCTAGTTGGGTTTCCAGTGGTTACATTCCATTTTTCTGATGGGGCAGATTTGGCTTTGGACTCGGGAAGTTTTTTTCATCAATTCAATGATAAGGTATTTTGCATGACTATAGGTCCAGTCAATGACCTTGACAACAGAAGCAAGCCTTCAGTTATTGGATTGTTGGCTCAACAGAGTTACAACGTGGGATATGACCTGGATAATCACTTGGTTTACTTTCAAAGAATTGATTGTGAACTTCTTAGTGGTTGA 1341 0.4295 MAFAYEPLHLLLLLYFSTCFLSSTSTTSSVKPQRLVSKLIHPGSVHHPHYKPNETTKDRMELDVQHSATRLAYIKARIENSLVSNEYTASAFPSSTGRTILANISIGQPPTPQLVIMDTASDILWVMCAPCSNCDHHSGQLFDPSKSSTYSPLCNTPCDFKGCKCDPLPFRISYVDSSSASGTYGHDMVLFETTDEGTSQMWGVLFGCGHNIGYNRDPGYNGILGLNYAPSSLATQIGQGFSYCIGNLADQYYSYNQLILGEGADLEGYSTPFQVHYGFYYVTMEGISVGERRLDIAPETFEIKEDGTGGAIIDTGCTLTYLVDGVHELLYREVRNLLGKSFRQAIFENTPWMLCYYGSISRDLVGFPVVTFHFSDGADLALDSGSFFHQFNDKVFCMTIGPVNDLDNRSKPSVIGLLAQQSYNVGYDLDNHLVYFQRIDCELLSG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01512 446 Pfam Xylanase inhibitor N-terminal 102 261 IPR032861 -
Cca08g01512 446 Gene3D Acid Proteases 83 261 IPR021109 -
Cca08g01512 446 Gene3D Acid Proteases 267 444 IPR021109 -
Cca08g01512 446 PANTHER OS07G0603500 PROTEIN-RELATED 25 443 - -
Cca08g01512 446 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 25 443 - -
Cca08g01512 446 Pfam Xylanase inhibitor C-terminal 280 437 IPR032799 -
Cca08g01512 446 ProSiteProfiles Peptidase family A1 domain profile. 100 437 IPR033121 -
Cca08g01512 446 CDD pepsin_A_like_plant 101 441 IPR034161 -
Cca08g01512 446 SUPERFAMILY Acid proteases 101 441 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01512 Cca-Chr8 44537220 44538887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01512 75 444 Miscellaneous Gene Families AT1G44130 23.325 9.92e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01512 - - gmx:100781790 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01512 08 44537220 44538887 Cca08g01512 08 44537220 44538887 ECH