Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01506 ATGGATTCGGATACTGAGGACAGAATGTCCAAATTGCCCaagaaggagaaacacaagaagagcaagaagaaaaagGATGTTCCACCTCAAACTGATCAAATTGAGGTGGATGTCGAGGTTGTCCATGAGCACCCCAATAAAACCCCTCCTGTTGTTGGTTATTTCCCTTCCGGCTTTGATCCACTCAAGGATCATGGTGGTGCCCCCGATTTTCAAGTTTACCGGCACCGGAACCTGCCCAAGAGGATGCAGCTTGTGGTTAGCCCTGCCGGTTCTGCGGTGGAATTCGTCGGAACCAGTTATGCTGGCGAGGCTACGGCCGGACACCGGGCCATGTATGCGATTGGGGTTCTTGACAAGGAAGCTCAGACCCTGAAGATTGTGCCTATTGCTGGTAATAAGATATTCAGATTGGAGCCAAAGGTTAAAGGTATGGGAGCTGCTGACAGTGAGCCTGCTCATTCGACGTTGGAAGAGATGACTCCACAGCAGAAGTTAGCAGAGACTACTGCTATATGGGGAACAAAGAGGGATATGGAGAAGGTATCTTCTGACTCATATTTAACCCTTTTGCTAGTTGTGCTATCATCAGCTACAGAACCTGAATTCAAGGATGAGTCGGAAAAGAGGAAGCTTTCCTGCATGTTCTCATACATCAATCATCTTATAAAGTTCAAAGATCAGTTTTCTTTTAACGCTTCCTCTGCCAAGACCCATAAAATCCCCAACATTCTGCGTCATAAATTTTCAACCATGTTTGCTGTTTCTGAATCAAAAAGGCTTCCCCCTGAAAAGATTAGTCTTCTCATTTGTTATGTCTTGGTGCTTACGCTTTTCTCTGACGAGTTCCGAACTGACTACACAGATATAGCAAAGGATCTGAGCATGAGCGCGATGTCTGTGAGACAACTCTATGAGCAATTGGGTTGCAAAATTTCCCGCCAGAGTAACTGCTTCTTTGCCACGCTTCCTGTCCCTCTTAAATTTCCTGATTTAAGGCTTAGGAAGCGGAAAAGGTAG 1020 0.4441 MDSDTEDRMSKLPKKEKHKKSKKKKDVPPQTDQIEVDVEVVHEHPNKTPPVVGYFPSGFDPLKDHGGAPDFQVYRHRNLPKRMQLVVSPAGSAVEFVGTSYAGEATAGHRAMYAIGVLDKEAQTLKIVPIAGNKIFRLEPKVKGMGAADSEPAHSTLEEMTPQQKLAETTAIWGTKRDMEKVSSDSYLTLLLVVLSSATEPEFKDESEKRKLSCMFSYINHLIKFKDQFSFNASSAKTHKIPNILRHKFSTMFAVSESKRLPPEKISLLICYVLVLTLFSDEFRTDYTDIAKDLSMSAMSVRQLYEQLGCKISRQSNCFFATLPVPLKFPDLRLRKRKR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01506 339 MobiDBLite consensus disorder prediction 1 34 - -
Cca08g01506 339 Pfam A49-like RNA polymerase I associated factor 200 330 IPR009668 GO:0003677|GO:0006351
Cca08g01506 339 Pfam A49-like RNA polymerase I associated factor 70 178 IPR009668 GO:0003677|GO:0006351
Cca08g01506 339 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 201 339 IPR009668 GO:0003677|GO:0006351
Cca08g01506 339 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 10 181 IPR009668 GO:0003677|GO:0006351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01506 K03005 - gmx:100812427 261.922