Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01491 ATGTGGTTTTCCTTCTGGAGATCCAGAGATCGTTTTTCCTTGGATCAACTCAGGTACTTGGCTGACCAATTGACGAAAGTTCAAATAGTTAATGAGGTTAATAAGGATTTTGTTATTGAGGCACTGAGATCCATAGCGGAGTTGATAACATATGGCGACCAACATGACCCAAGCTTTTTTGAATTCTTCATGGAAAAGCAAGTTGTGGGAGAGTTTGTACGTGTTCTTAAACTTAGCAGAACTATGAGCATTCCACTTCAGTTGCTACAAACAGTGAGCATTATGATCCAGAACCTAAGAAGTGAACATGCTATATACTATATGTTTAGCAATGAACATATGAACTACCTAATTACATATCCATTTGACTTTCGCAACGAAGAACTATTGTCATACTACATATCCTTTTTAAGAGCAATAAGTGGAAAATTGAACAAGAATACAATTTCTCTGCTTGTGAAGACTCGCAATGATGAAATAGTTTCATTTCCACTCTATGTTGAAGCAATACGCTTTGCCTTTCATGAGGAGAGCATGGTTCGTACTGCTGTCCGTACTGTGACCCTTAATGTTTATCATGTTGGGGATGAATGTGTTAATAGATATATAGCCAGCGCACCTCACACTGATTACTTCTCAAACCTGGTTTCATTCTTTAGGAATCAATGTATGGATTTAAATAGACTGGTCTCTGAGACACTGAAAAATCCAGGTCCAGATTCAACCTCTGCAATTATTGCTGCTGTAGATGAAATTGAGGATAACCTGTATTACTTTAGTGACGTTATCTCTGCTGGAATTCCTGATGTTGGGAGGCTAATAACAGACAGCATTCTGATGCTTCTGATTTTTCCAATTCTTCTTCCTTCCCTGAGATTACTGGATGTTAATGACATGCAAAGTGGTGTTGTCACTTCTCTCTACTTACTTTGTTGCATCTTAAGGATAGTCAAAATCAAAGATTTGGCAAATACCATAGTCGTGGCACTTTTTTATCCCTTAGAGGCCCTTACAACATTTTCTAGGGGTAAAGTCAATGGCTATATATCTGATCTCGGTTTTACCTCTGTAAGCCAAGAACCAGATAATGATAATATTGCCAAGTGCAATGCAGAATGCTTGACAGTGAATGTGCCAAACCCTTCTAGTTCTCCAAGTTTTCACTCAGAAAGTATGTCAGAAGATAATTGTAGCAATTCAAATTTGGCTTTAAGGGAGGTTTTTCTTGCATATATTACAAAAGGGAATGACTTACAAGTTTTGGGTTCTCTGAGTGTGCTTGCCACCTTACTTCAAACTAAAGAACTTGATGAATCAATGTTAGATAGGCTTGGAATTCTTCCACAACGCAAACAGCACAAGAAACAGTTATTGCAAGCTTTGGTTGGCGAGGATTCAGGTGAAGAGCAACTTTTTTCTTCTGAAAATAGCTTGGCGAGGGATGGCAGTGGCTGTGAGCTTGATGTCTATCTTGAAAAGATCAAGGAGCAGTACGGGTTATCTTTTCTGTCTTCTGATTTCATAACAAGCCCTCGTGTGCCGCGATTTCAGGTGCTCGATGCATTAGTGAGCCTCTTTTGTCGTTCTAATATATCTGCAGAGACACTGTGGGATGGTGGTTGGCTTTTACGCCAGTTGCTTCCTTACAGTGAGGCAGAATTCAACACTCAACACCTGGAATTGCTGAAAGATTCATACAAGAATTCTGCTACTGCTCTTGTAAAGGAGGTTAGAGGTTTCTGGCTCGATCTTCTTATCACCGTTCTTTGTAATGAGTGGAGAAAATGCAAAAGAGCAATGGAGTCATCATACCCTCCAAAAGAACCCAAGTGCATACTTTTTCCATCTCAGATGCTCTCTTCAGAAGAAGATATACCCGAGGGCTCATCATTTGCTGCTGGAGAAAGAATGCATGAATCTGTGAAGGTATTTGTAGTTCTGCACCAACTTCAAATATTCACTCTAGGTAGACATGTGCCTGAACAGCCTCTTATTTATCCTCCTGGTGATCTCCCAGCAAATTCTCGTGCTCAGACTTCTGGACTTGATATTTCAGGCCCAAAACCAGGAACTGAAGTCAGCCTTGGTAAATGTTCCAACTGGAGTTTTCTTTATGCTCTTTTTGTGATTGACACAAATATATCTTATATTTCCAAAAATCCTAATTTTCATTTCCCATGCAGTCGAATCCCATTCTGCCTACTCCATACTCTATATTCCTTCTCCTTTTTCCTTTAG 2238 0.3954 MWFSFWRSRDRFSLDQLRYLADQLTKVQIVNEVNKDFVIEALRSIAELITYGDQHDPSFFEFFMEKQVVGEFVRVLKLSRTMSIPLQLLQTVSIMIQNLRSEHAIYYMFSNEHMNYLITYPFDFRNEELLSYYISFLRAISGKLNKNTISLLVKTRNDEIVSFPLYVEAIRFAFHEESMVRTAVRTVTLNVYHVGDECVNRYIASAPHTDYFSNLVSFFRNQCMDLNRLVSETLKNPGPDSTSAIIAAVDEIEDNLYYFSDVISAGIPDVGRLITDSILMLLIFPILLPSLRLLDVNDMQSGVVTSLYLLCCILRIVKIKDLANTIVVALFYPLEALTTFSRGKVNGYISDLGFTSVSQEPDNDNIAKCNAECLTVNVPNPSSSPSFHSESMSEDNCSNSNLALREVFLAYITKGNDLQVLGSLSVLATLLQTKELDESMLDRLGILPQRKQHKKQLLQALVGEDSGEEQLFSSENSLARDGSGCELDVYLEKIKEQYGLSFLSSDFITSPRVPRFQVLDALVSLFCRSNISAETLWDGGWLLRQLLPYSEAEFNTQHLELLKDSYKNSATALVKEVRGFWLDLLITVLCNEWRKCKRAMESSYPPKEPKCILFPSQMLSSEEDIPEGSSFAAGERMHESVKVFVVLHQLQIFTLGRHVPEQPLIYPPGDLPANSRAQTSGLDISGPKPGTEVSLGKCSNWSFLYALFVIDTNISYISKNPNFHFPCSRIPFCLLHTLYSFSFFL 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01491 745 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
Cca08g01491 745 PANTHER UNCHARACTERIZED 1 696 IPR039272 -
Cca08g01491 745 PANTHER PROTEIN TRANSPARENT TESTA 9 1 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01491 Cca-Chr8 44045635 44061878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01491 K19513 - gmx:100789779 1239.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01491 08 44045635 44061878 Cca08g01491 08 44045635 44061878 ECH