Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01472 ATGGCTGCATCATCTGCGAGACTCGCGGTAACAGCGTTGGTGTTGCTCGTGGCTTTCGCAACAATCTCTCTCCAAGCTTCAGCGTCAGCTTCATCCGTCGGTAAATTCGTCGACGAAACCATCACTTCCCACAAGATCGTCATTTTTTCCAAGACCTATTGCCCGTACTGTAAAAGAGCAAAAGCTGTTTTCGAAGAGTTGAACCAAGTTCCATATGTTGTTGAGCTTGATGAGAGAGAGGATGGTTCAAAGATTCAGGATATCATGACTAACATTGTTGGGAGGCGAACTGTGCCACAAGTTTTCATTAATGGAAAACACCTAGGAGGCTCAGATGAAACTGTTGAAGCTTACGAGAGCGGAAAGCTGGCTAAACTTCTAGGAATTGAGACAGAGGATCATGATGATCTCTGA 414 0.4517 MAASSARLAVTALVLLVAFATISLQASASASSVGKFVDETITSHKIVIFSKTYCPYCKRAKAVFEELNQVPYVVELDEREDGSKIQDIMTNIVGRRTVPQVFINGKHLGGSDETVEAYESGKLAKLLGIETEDHDDL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01472 137 Gene3D Glutaredoxin 24 128 - -
Cca08g01472 137 PRINTS Glutaredoxin signature 46 64 IPR014025 -
Cca08g01472 137 PRINTS Glutaredoxin signature 91 104 IPR014025 -
Cca08g01472 137 PRINTS Glutaredoxin signature 105 118 IPR014025 -
Cca08g01472 137 SUPERFAMILY Thioredoxin-like 35 127 IPR036249 -
Cca08g01472 137 Pfam Glutaredoxin 46 107 IPR002109 -
Cca08g01472 137 CDD GRX_GRXh_1_2_like 45 126 - -
Cca08g01472 137 PANTHER BNAA02G04900D PROTEIN 13 124 - -
Cca08g01472 137 ProSitePatterns Glutaredoxin active site. 48 63 IPR011767 -
Cca08g01472 137 PANTHER GLUTAREDOXIN 2 13 124 - -
Cca08g01472 137 ProSiteProfiles Glutaredoxin domain profile. 34 134 - -
Cca08g01472 137 TIGRFAM GRX_euk: glutaredoxin 46 127 IPR011899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01472 Cca-Chr8 43627931 43630547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01472 37 127 Miscellaneous Gene Families AT4G15700 30.769 7.51e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01472 K03676 - gmx:100777703 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01472 08 43627931 43630547 Cca08g01472 08 43627931 43630547 ECH