Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01461 ATGGCAGACAAACCCCAACCGGTTCGAGTACTGTACTGCGGGGTGTGCAGTTTACCACCCGAATACTGCGAATTCGGATCCGATTTCGATAAATGCAAACCCTGGTTGATTCAAAATGTTCCTGACCTTTACCCTAATCTTATTAAAGAGGCGAATGATAAGGAAGCTGATAGAGTTGCTGACAAGCTGCAAGGTACCGGTATATCATCCGGAGCTGGTGATGGAGCTGCTTCCTCAGCACCGAAAGAAGAGGTGAAACGTCTTCCTGGTGGGAAGATAAAGAAAAAGGAGAAGCAAGAGGTTATTATTGAGAAGGTTGTGCGCAACAAGCGAAAGTGTATCACCACTGTGAAGGGCCTGGAACTATTTGGTGTCAAGCTCAGTGATGCTTCAAAGAAACTTGGGAAAAAGTTTGCTACAGGAGCCTCTGTTGTCAAGGGCCCGACTGAGAAAGAACAAATTGATGTTCAAGGGGATATAGCTTATGACATCGTGGAGTTCATTACAGATACTTGGCCTGACGTTCCAGAAGCAGCAATTTTCTTTATAGAAGATGGGAGAAAGGTTCCAGCTGCTTGA 579 0.4542 MADKPQPVRVLYCGVCSLPPEYCEFGSDFDKCKPWLIQNVPDLYPNLIKEANDKEADRVADKLQGTGISSGAGDGAASSAPKEEVKRLPGGKIKKKEKQEVIIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITDTWPDVPEAAIFFIEDGRKVPAA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01461 192 PANTHER TRANSLATION MACHINERY-ASSOCIATED PROTEIN 22 1 192 - -
Cca08g01461 192 MobiDBLite consensus disorder prediction 65 86 - -
Cca08g01461 192 PANTHER DENSITY-REGULATED PROTEIN HOMOLOG 1 192 - -
Cca08g01461 192 CDD DENR_C 99 184 IPR046447 -
Cca08g01461 192 ProSiteProfiles Translation initiation factor SUI1 family profile. 101 172 IPR001950 GO:0003743|GO:0006413
Cca08g01461 192 Pfam Translation initiation factor SUI1 98 171 IPR001950 GO:0003743|GO:0006413
Cca08g01461 192 Gene3D - 72 177 - -
Cca08g01461 192 SUPERFAMILY eIF1-like 19 182 IPR036877 GO:0003743|GO:0006413
Cca08g01461 192 TIGRFAM DRP1: density-regulated protein DRP1 7 180 IPR005873 GO:0003743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01461 K24272 - gmx:100306708 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01461 08 43348964 43353734 Cca08g01461 08 43348964 43353734 ECH