Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01435 ATGGCCACATCGGTGAAGAACAACTTTCTGAACCCTGCACTGGTTTCAAATCTCCAACAAGCACTGATCCGTAGAAAGGACAGTGTGCAGGAGCAGCACCTCAACAAAGCCAAAGAACCCTCAAAAGCTTCTTCCAAGCCCGTGGTACTAGTCACCAATGGAGAAGGCATAGACTCTCCTGGCCTCACACTCCTCGTTGAGGCACTCCTTCGTGATGAACTTCTTGATGTCCATGTCTGTGCCCCACAATTGGATAGATCGGTGTGTGGTCACTCGGTTACCACTGGGGAGACTCTAGCTGTGTGTTCAGCACAAGTTGGTGGTGCCAACGGTTTTCAAGTGTCAGGAACCCCTGCAGATTGTGTCTCTTTGGCTTTATCTGGGGCATTGTTTTCTTGGTCAAAACCTGTTTTGGTAATTAGTGGACTAAACAAAGGAGCAACTTGTGGTTATGACACGTTGTACTCCGGAGCTGTTGCTGGAGCTAGAGAAGCACTGATTTGTGGTGTGCCTTCTCTTTGTATATCATTGAACTGGGAAAAGAATGTGAGCAGTGAAAGTGATTTGAAGGATGCAGTTACCGCATGTTTACCATTAGTTCACGCAGCCATAAGAGATATTCAGAAAGGGATTTTCCCCAAGAATTGCTTCCTCAATATAGCGATCCCAAGCTGTCCTCTGACAAATAAGGGTGTCAAAGTGACAAGGCAAAGTCCACAGAGGTCTTCCTTAAGTTGGCAGGCTGTGTCAACAAATACGAATCCTTCAGCCGGACGTTACATGTCTAACCAGCAAAGTCTTGGAATCATGTTAGCACAACTAGGACGAGATGCCTCTGCTGCTGCAGCAGCACGGCGTTTAAACTCAAACCGTAAGAACGTGGAGGTTGAATCAGTTGGTGTTGCTGGAAAACTCAGTTCTCAACAAACCATAAAGAAATACTTCAGAATGGAGTTAACAGAGAAAAGGCAGCAGAACATAGAGGAGGATTTAGACTCAAGAGCACTTGAAGAGGGATTTGTTACAGTTACCCCTTTATCTTTGTATGCAAATAGTCACATGGAAATTCAGTCATCAGTGTCCAGCTGGTTAGCTATTGCACTCAGTGGTGATCAATGA 1119 0.4558 MATSVKNNFLNPALVSNLQQALIRRKDSVQEQHLNKAKEPSKASSKPVVLVTNGEGIDSPGLTLLVEALLRDELLDVHVCAPQLDRSVCGHSVTTGETLAVCSAQVGGANGFQVSGTPADCVSLALSGALFSWSKPVLVISGLNKGATCGYDTLYSGAVAGAREALICGVPSLCISLNWEKNVSSESDLKDAVTACLPLVHAAIRDIQKGIFPKNCFLNIAIPSCPLTNKGVKVTRQSPQRSSLSWQAVSTNTNPSAGRYMSNQQSLGIMLAQLGRDASAAAAARRLNSNRKNVEVESVGVAGKLSSQQTIKKYFRMELTEKRQQNIEEDLDSRALEEGFVTVTPLSLYANSHMEIQSSVSSWLAIALSGDQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01435 372 Gene3D - 37 365 IPR036523 GO:0016787
Cca08g01435 372 SUPERFAMILY SurE-like 48 362 IPR036523 GO:0016787
Cca08g01435 372 PANTHER 5'-NUCLEOTIDASE SURE-LIKE 1 372 - -
Cca08g01435 372 PANTHER 5'-NUCLEOTIDASE SURE 1 372 IPR030048 GO:0008252
Cca08g01435 372 Pfam Survival protein SurE 49 241 IPR002828 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01435 Cca-Chr8 42653889 42658189 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01435 K03787 - gmx:100785738 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01435 08 42653889 42658189 Cca08g01435 08 42653889 42658189 ECH