Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01432 ATGGGATTATCACTTTCTTTACTCTCATCAGCCTGGGAAGAAATCGTTAGACATTCATTCTTTGGTCTGTCTTTGAACTTGGCCTTTGGTTCCAAAGATGGGGCAGTGATTCTGAGAGCAGGTAGCTTCAAGAAAAGAGAATCTGAAACCACTTCTGCGTTGTCAAAGGGTTCAAGCAAGTTGAATGATTGTAGACCCGAACACATGATCCTTGAAAGGAACCTTTCATGCATTAAAGATATGGAGATCATGGGGTCAAAGGAAAGTGAACAATTGCAGCATAAGCCAGTGCCTGTTCTTTCTCTGCCTAAAGAAGTGGTTTTCTCTTCACCAAGACCAGTTAGTGAGCTTGATGCTGCAGCAACTAAACTTCAAAAGGTGTACAAGAGTTACCGTACTAGAAGAAACCTTGCAGATTGTGCTGTTGTGGTGGAAGAACTCTGGTGGAAGGCACTAGATTTTGCTGCTCTTAAAAGGAGTTCTGTTTCATTCTTTGATGTGGAGAAACAAGAAACTGCTGTGTCAAGATGGTCAAGAGCAAGGACAAGAGCTGCTAAGgttggaaaaggtttgtccaaggatgataaggctcaaaaattagccctgcaacattggcttgaagctATTGACCCTCGTCATCGGTATGGACACAATTTGCACATGTATTATGATATTTGGTTTGAAAGCCAAAGCACACAACCATTTTTCTACTGGTTGGATGTTGGAGATGGTAAAGAAATAAATCTCGAGAAATGCCCAAGAACCACCCTTCAACGCCAGTGCATCAAATATCTTGGACCAAAAGAAAGGGAAGAGTACGAAGTAATTGTTGAAAACGGGAAGCTGGTATACAGACAGAATGGGGGGCTTGTGGATACTGATGGAAAGTCCAAATGGATATTCGTTCTTAGCACCACAAGGTCCTTGTATGTAGGACGCAAGCAGAAAGGTTCATTTCAACACTCTAGCTTTCTAGCTGGTGCTGCTACAACAGCTGCAGGCAGATTAGTTGCTCAACAAGGTGTACTTGAGGCTATTTGGCCATACAGCGGTCACTATCACCCCACGGAAGAGAACTTCAAAGAATTCATAAGCTTTCTTGACGAGCACAACGTGGACCTTTCTAATGTCAAGAAATGTGCCATAGATGATGATGCACCTTCAATTGTTGGGTCCATTTCATTTAGTGAGATTAATGAATCACAACAACTGAATAAGGGTCCCTCTCTATCTTCTTCTCAATCGGGCTCAGCAGCTTCCACTAATGTCAACAACAATGGCATCACCATTAATGCGAAGGCCCATAAAGACATTGAAAAGAAGGTGTTTGACGTGTCCAAGAGGCTATCATGCAAGTGGTCCACTGGGGCTGGGCCCAGGATCGGCTGTGTGCGTGACTACCCTGAGCACCTCCAATCAAGGGCGTTGGAGCAGGTTAACCTCTCGCCAAGGCCCGCTTCCGCACGCCCGTATAGCTACGGCCCAATCCCCTCGCCCAGGCCCAGCCCAAAAGTTAGGATGTCTCCCAGGCTGGCTTACATGGGCTTGCCCAGCCCAAGACCCTCAATTCCTTCTGCAAGTTAA 1584 0.435 MGLSLSLLSSAWEEIVRHSFFGLSLNLAFGSKDGAVILRAGSFKKRESETTSALSKGSSKLNDCRPEHMILERNLSCIKDMEIMGSKESEQLQHKPVPVLSLPKEVVFSSPRPVSELDAAATKLQKVYKSYRTRRNLADCAVVVEELWWKALDFAALKRSSVSFFDVEKQETAVSRWSRARTRAAKVGKGLSKDDKAQKLALQHWLEAIDPRHRYGHNLHMYYDIWFESQSTQPFFYWLDVGDGKEINLEKCPRTTLQRQCIKYLGPKEREEYEVIVENGKLVYRQNGGLVDTDGKSKWIFVLSTTRSLYVGRKQKGSFQHSSFLAGAATTAAGRLVAQQGVLEAIWPYSGHYHPTEENFKEFISFLDEHNVDLSNVKKCAIDDDAPSIVGSISFSEINESQQLNKGPSLSSSQSGSAASTNVNNNGITINAKAHKDIEKKVFDVSKRLSCKWSTGAGPRIGCVRDYPEHLQSRALEQVNLSPRPASARPYSYGPIPSPRPSPKVRMSPRLAYMGLPSPRPSIPSAS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01432 527 MobiDBLite consensus disorder prediction 490 504 - -
Cca08g01432 527 MobiDBLite consensus disorder prediction 403 425 - -
Cca08g01432 527 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 1 525 IPR044159 -
Cca08g01432 527 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM5 1 525 - -
Cca08g01432 527 MobiDBLite consensus disorder prediction 482 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01432 Cca-Chr8 42594054 42598211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01432 - - gmx:100784098 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01432 08 42594054 42598211 Cca08g01432 08 42594054 42598211 ECH