Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01426 ATGGGTGACAGCAATGTTCCATCTGAGTCTTTAAAGAAAAAATCAGATCTTATTGATGGAGACTCAACAATTTTTATGGCTAATAATAGTAGCACCTCATTAGAAACCATTGTACAAAGTTTCCAAGATTCAATGTCTCTTGGTAAGAAACACAAGTTTTGGGAAACTCAACCTGTGGGGCAATACAAGGATGTTGGGGACCCTAGTTTACCTGAAGGCCCTATTAAGCCCCCAACACCTTTGTCTAAGctaattgatgttgggtTCTCAAGGCTTGGTGCTAGGATGACGATGAGTCGAACTATAAAACTTTACAAATTGCCCAATTCAACGGTTACTCCTGGATTTAGGAAAATGGAGTTACGGGATGTCCCTGCTGTTACTCGACTACTTAGGAACTACTTGAACCAATTTGTTGTTGCACCTGATTTTGATGAAAATGATGTTGAACATTGGCTTCTTCCCAATGAGAATGTGGTGGATAGTTTCTTAGTGGAGAGTCCAAAGACTCATGAGGTCACAGACTTCTGTAGCTTCTATACTCTTCCTTCTTCTATCCTCGGAAATCAAAATCACTCAATTTTGAAAGTTGCTTATTCTTATTATAATGTTTCCACCAAAACTCCACTAGCTCGGTTGATGAATGATGTGCTAATTATGGCAAAACAAAAGGATTTTGATGTTTTCAATGCTTTGGATGTAATGCACAATGAGAATTTCCTTAAAGAGCTCAAGTTTGGTCCTGGAGATGGACAACTTCACTACTACTTGTACAATTATAGGATTCATAATGCCTTGAAACCATCTGAACTTGGGCTTGTTCTTTTGTAG 831 0.3779 MGDSNVPSESLKKKSDLIDGDSTIFMANNSSTSLETIVQSFQDSMSLGKKHKFWETQPVGQYKDVGDPSLPEGPIKPPTPLSKLIDVGFSRLGARMTMSRTIKLYKLPNSTVTPGFRKMELRDVPAVTRLLRNYLNQFVVAPDFDENDVEHWLLPNENVVDSFLVESPKTHEVTDFCSFYTLPSSILGNQNHSILKVAYSYYNVSTKTPLARLMNDVLIMAKQKDFDVFNALDVMHNENFLKELKFGPGDGQLHYYLYNYRIHNALKPSELGLVLL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01426 276 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 1-RELATED 83 276 - -
Cca08g01426 276 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 81 276 IPR016181 -
Cca08g01426 276 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 245 251 IPR022678 GO:0004379
Cca08g01426 276 Gene3D - 79 276 - -
Cca08g01426 276 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 92 IPR016181 -
Cca08g01426 276 PANTHER N-MYRISTOYL TRANSFERASE 11 83 IPR000903 GO:0004379|GO:0006499
Cca08g01426 276 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 86 264 IPR022677 GO:0004379
Cca08g01426 276 PANTHER N-MYRISTOYL TRANSFERASE 83 276 IPR000903 GO:0004379|GO:0006499
Cca08g01426 276 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 1-RELATED 11 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01426 Cca-Chr8 42517204 42518517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01426 1 84 Acyl Lipid Metabolism Gene Families AT5G57020 56.471 1.74e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01426 K00671 - gmx:100789104 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01426 08 42517204 42518517 Cca08g01426 08 42517204 42518517 ECH