Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01386 ATGAGTCTCTTCGGTCTTGGAAACAGAAACCAAAAAACATTTCGTCCAAAAAAGAGTGCTCCATCTGGAAGTAAGGGTGCTCAACTTCAAAAACACATCGATGCCACGTTGGGTAGTGGAAACTTGAGGGAAGCAGTTAAACTCCCTCCTGGCGAAGATATCAATGAGTGGCTGGCCGTGAACACCGTGGACTTCTTTAATCAAGTGAATATTTTGTTTGGTACACTTACGGAATTCTGCACACCAAGTAACTGCCCTACAATGTCTGCAGGACCAAAGTATGAGTATCGATGGGCTGATGGTGTTACTATCAAGAAACCTATTGAGGTATCTGCTCCAAAATATGTTGAGTTTTTGATGGATTGGATTGAATCTCAGCTAGATGATGAAACAATTTTCCCCCAAAAATTAGGGGCTCCCTTTCCATCCAATTTCCGAGACGTGGTCAAGACAATTTTCAAACGATTATTCCGTGTATATGCTCACATTTATCACTCACATTTCCAGAAGATAGTGAGTTTGAAGGAAGAAGCTCATCTTAATACTTGTTTCAAGCATTTTGTTTTGTTTACTTGGGAATTCCGTTTAATTGATAAAGCAGAGTTAGCACCTCTTGAGGAACTTGTTGATTCTATTATACAGTTATAG 648 0.3981 MSLFGLGNRNQKTFRPKKSAPSGSKGAQLQKHIDATLGSGNLREAVKLPPGEDINEWLAVNTVDFFNQVNILFGTLTEFCTPSNCPTMSAGPKYEYRWADGVTIKKPIEVSAPKYVEFLMDWIESQLDDETIFPQKLGAPFPSNFRDVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFVLFTWEFRLIDKAELAPLEELVDSIIQL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01386 215 Gene3D MOB kinase activator 3 214 IPR036703 -
Cca08g01386 215 SUPERFAMILY Mob1/phocein 16 213 IPR036703 -
Cca08g01386 215 PANTHER MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB 2 213 IPR005301 -
Cca08g01386 215 Coils Coil 205 215 - -
Cca08g01386 215 MobiDBLite consensus disorder prediction 1 26 - -
Cca08g01386 215 PANTHER MOB KINASE ACTIVATOR-LIKE 1A 2 213 - -
Cca08g01386 215 Pfam Mob1/phocein family 35 205 IPR005301 -
Cca08g01386 215 SMART Mob1_phocein_2 32 205 IPR005301 -
Cca08g01386 215 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01386 Cca-Chr8 41517675 41521513 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01386 K06685 - gmx:100794894 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01386 08 41517675 41521513 Cca08g01386 08 41517675 41521513 ECH