Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01376 ATGAGGGGAAGGGACACCGTTACAGTATTGGCGAGGTGGGGATCGAAGAACCCTGGAATCCAACCTCCGATGGCAGCAACGGACAGATACGCTTCTCCGGCCGCCGCATCGGCGGAGGACAACGCTCTCTTTCTCGATATACTGCACGAGGCTCCTCTCTTCGCTCACCGCAAGGCCGCGAGGGTTCTCGGGAGTGTCTTCTACTGCATACTATTGGCAGGTTATGCTACTTTGGCCATTGGAGCTCCCTGGATATTTCGCCCTGTTCAAGGACTCATCTCTCCCGTGCTTTGCAGCTGTGATGTGCTTCTTTTGCTGTTAACAGGAATCTTTCAACAATACTTGGTTTATCAAGTACAGAAGATACGCTTGCAGGGATATTATAGTTTCAGCCAGAAGTTGAAATTTATTGTTCGCATACCCTTTTCTATTACAGCGTATGGAACTGCTGCAATGCTACTTGTCATAGTCTGGAAACCATACACTGGTTTTCTGTCAATCTCTGCAATATTGAGGATTATTATGATAGTTGAAGCAGTAAGTTCTGGATGTTTTATGAGTCTTTACATCGGTTACATACACCAGTACAATTCATTGAACTCACATCCTGATGTTCTGAAGTCTTTATACTCACCACTACAGCCATCAAGTTCTCTGGAGGGTCTAAGGTACCATGACGGTAGGCTCTCTGATCAGCAAATGGCTTTGCTGCAATATCAGCGTGAAAATCTTCATTTTTTGAGTGAGGAGATCCTTCGATTGCAAGAATGTTTAAGCAAATATGAAAGAACTGATGATCGGAGCACACCACAGGTTGACCTTGCCCATCTACTAGCAGCTCGTGATCAGGAGTTACGGACACTTTCTGCAGAGATGAACCAGGTGCAATCTGAGTTAAGGCTTGCCCGGTCCTTAATCGCTGACAGGGACTCAGAGATCCAGCATGTTCGCATGACCAACAATCAGTACGTAGAAGAGAATGAGAGACTCAGAGCTATTTTGGGAGAATGGAGTACCCGAGCTGCCAAGCTTGAGCGAGCACTGGAGGTTGAGAAGATGTCAACGCTTGAATTACAAAGGAAGCTTTCAACGCTAAGAAGTCAAACGAATACCTCAGCAGAAGCAACTGAACATGGAGCTTAA 1143 0.4611 MRGRDTVTVLARWGSKNPGIQPPMAATDRYASPAAASAEDNALFLDILHEAPLFAHRKAARVLGSVFYCILLAGYATLAIGAPWIFRPVQGLISPVLCSCDVLLLLLTGIFQQYLVYQVQKIRLQGYYSFSQKLKFIVRIPFSITAYGTAAMLLVIVWKPYTGFLSISAILRIIMIVEAVSSGCFMSLYIGYIHQYNSLNSHPDVLKSLYSPLQPSSSLEGLRYHDGRLSDQQMALLQYQRENLHFLSEEILRLQECLSKYERTDDRSTPQVDLAHLLAARDQELRTLSAEMNQVQSELRLARSLIADRDSEIQHVRMTNNQYVEENERLRAILGEWSTRAAKLERALEVEKMSTLELQRKLSTLRSQTNTSAEATEHGA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01376 380 Coils Coil 278 305 - -
Cca08g01376 380 Pfam TMEM192 family 96 252 IPR029399 -
Cca08g01376 380 PANTHER TRANSMEMBRANE PROTEIN 192 27 372 IPR029399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01376 Cca-Chr8 41414296 41421832 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01376 - - gmx:100810116 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01376 08 41414296 41421832 Cca08g01376 08 41414296 41421832 ECH