Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01365 ATGGCTTCCAATCTGATTAGAGCAAGCTCAAGCTTGGTTCTAGTGATTTTAGTAGCTCTCACAGTTCAAATCTTTTACTTCTCACCCATAGATCCAGTTTTTCTGGATATAATAAAACCTGCATCTTCAACCAAAGACAACAAATTACAGGATATCATTAAACTGGGAGAAGGACTTGTGAAGGAACCAGAAGATGTTTCTGTGGATAAAGAAGGGACTCTCTATGCAGTTACTCGTGATGGTTGGATTAAAAGATTGCGCAGGAATGGAAATTGGGAGGATTGGAAGCATATAGATAGTAATACCTTGCTAGGATTCACAACAGCCAAAGACGGTGGTCTCATTATTTGTGACACTGACGAGGGTTTGCTCAAAGTTACAGAAGATGGTTTCAGTGTAATCGTTTCACAAGTAAATGGTTCTCCCTTAAGGTTTGCAGACGACGTGATAGAAGCCTCGGACGGGAATATATATTTCAGTGTTGTTAGTACAAAATTTGATGTTCAATATTGGTACATGGATGTGTTAGAGGCAAGACCTCATGGACAACTTCTCAAGTACAATCCCACATCGAATGAGACTGTTATTTTGCTCGATGACGTTGCCTTTGCTAACGGCGTTGCACTCTCCAAGGACGAAGATTATGTTGTGGTCTGTGAAACTTGGAAATATAGGTGTCTGAGGCATTGGTTAAAAGGAGAAAAGAAAGGCACAACAGATATTTTAATTGATAACCTCCCTGGTGCACCTGATAACATCAATCTTGCTCCTGATGGATCTTTCTGGATAGCTTTGCTTCAGTTGACTACTGAAGGATTGGAGTTTGTGCACGAGTACAAGATAACCAAGCACATCGTTGCTTCATTTCCAAGGCTAATCAACTTTGTCAATGGTGCAAAGACGAAAGCAACGGTGGTGAATGTGGCAACTAATGGCACGATAGTGAGAAAGTTTGATGATGGTGATGGGAAGGTCATTACATTCGTGACTTCAGCTGTTGAGTTTGAGGACCACCTTTACCTAGGCAGTCTTAATACCAACTTTGTTGGGAAATTACCACTGTATAGTGCATAG 1074 0.4088 MASNLIRASSSLVLVILVALTVQIFYFSPIDPVFLDIIKPASSTKDNKLQDIIKLGEGLVKEPEDVSVDKEGTLYAVTRDGWIKRLRRNGNWEDWKHIDSNTLLGFTTAKDGGLIICDTDEGLLKVTEDGFSVIVSQVNGSPLRFADDVIEASDGNIYFSVVSTKFDVQYWYMDVLEARPHGQLLKYNPTSNETVILLDDVAFANGVALSKDEDYVVVCETWKYRCLRHWLKGEKKGTTDILIDNLPGAPDNINLAPDGSFWIALLQLTTEGLEFVHEYKITKHIVASFPRLINFVNGAKTKATVVNVATNGTIVRKFDDGDGKVITFVTSAVEFEDHLYLGSLNTNFVGKLPLYSA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01365 357 PANTHER STRICTOSIDINE SYNTHASE-RELATED 10 354 - -
Cca08g01365 357 PANTHER ABC TRANSPORTER PERMEASE PROTEIN-LIKE PROTEIN 10 354 - -
Cca08g01365 357 SUPERFAMILY Calcium-dependent phosphotriesterase 25 353 - -
Cca08g01365 357 Pfam Strictosidine synthase 151 234 IPR018119 GO:0009058|GO:0016844
Cca08g01365 357 Gene3D - 46 355 IPR011042 -
Cca08g01365 357 Pfam Strictosidine synthase-like, N-terminal 47 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01365 Cca-Chr8 41112525 41117418 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01365 - - gmx:100798788 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01365 08 41112525 41117418 Cca08g01365 08 41112525 41117418 ECH