LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca08g01330	ATGACCGCGTCCAAGAAAAACTACAAAGAGAAACCAATTCGCCGCAAGGAAGAGAAAGCGGAAGAACCGGAAGTGCCAAAATACAGAGATCGAGCTAAAGAGCGTAGAGAAGATCAAAATCCTGATTATGAACAAACCGAACTTGGATTTCATGCAGTTGCTCCTCCTGGTACTGTGGATCTTCGGTCATCTGATGCGCACAAATTATCTATCGAGAAGAGCAAGTACCTAGGAGGTGATGTGGAACATACACATTTGGTCAAAGGTTTAGATTATGCTTTGCTGAACAAAGTAAGAAGTGAGATAGATAAGAAGCCAGATGCTGGGGATGATGGAGATGGGAAATCCAGGCCATCCAAGGAAGACCAACAAGTATCAATTCGCACAGCAACTGCAAAGTCAGTTTATCAGTGGATAGTAAAGCCTCAGACCATTAGTAAGACAAATGAAATGTTCCTCCCTGGTCGAATGACATTTATTTATAACATGGAGGGTGGGTACCATCATGATATTCCAACAACATTGCACCGTAGTAAAGCTGACTGTCCAGTGCCAGAGGAAATGGTTACAGTTAATGTTGATGGATCCGTTTTAGATCGAATTGCTAAAATAATGTCATATCTACGTCTTGGTTCTTCTGGGAAAATCCTAAAGAAGAAAAAGAAGGAAAAGGATGCAAAAGGGAAGATTTTGGCAGTTGGTAATGGATATGACAAAGAGGATAAGCCATCAAAGTTTGAAGGTGGGGCAAAAAATCAAATTGAAAAAGAAATAATCCCACCTCCTCCACCTCCCATAAAGAAAAATCCTCTTCATTCCAGAGAGAAACAAGGCCCAGCTGTTGCTAGAGAAGAAGATGATGACATTTTTGTAGGTGAAGGTGTTGATTATGAGGTACCTGGTAAAGACTTGAGCCAAAGTCCTGTCTCTGAGGACATGGAAGAGTCTCCTAGGAACAAAGAAAAACCTTCATATTTCACAGAACCTGCATATGGTCCTGTCCCTCCATCCATGCTTCCTCAAGGGTGGCAAGAAACAAATGGATACGATGTAATGCAAACTCAAGCCTTGGCTGGTGGTTACCAAGGAGAGTGGCAGGAATACCAGTATGCTGAACAACTGGCATACCCAGATCAATATCTCCAACAAAATATGCAGACTTATGATGTGCAAGCAGGTTTAAATCTTCCACAAGATCCACGATTTATGACTCAAGAAGAAAAGGATCGAGGTTTAGGGTCAGTGTTTAAGCGAGATGACCAGAGACTTCAACAGCTGAGGGAGAAAGATGCTCGTGAAAAAGATCCCAACTTTATCTCAGAGAGTTACTCTGAATGTTACCCAGGGTATCAAGAATATAACCGCGAGATAGTAGACAGTGATGATGAAGACGACTTGTCCAAAATGGATATGGGTGGAAGGGCTAAGGGACGTCTTCATAGATGGGACTTTGAAACTGAAGAGGAATGGGCTACCTACAATGAGCAGAAGGAAGCAATGCCAAAAGCTGCATTCCAGTTTGGTGTGAAGATGCAAGATGGCCGGAAGACCCGAAAGCAAAACAAGGACCAGAAGCTCAATAACGACTTGCATAAGATCAATAAGATACTTGCTAGAAAGAAGATGGAAAAGGACACCAATGGTGAGGGTGGGCACCATTATGATGACGAACCAACACCTGGAAAGAAGCTCCGAATATGA	1701	0.4256	MTASKKNYKEKPIRRKEEKAEEPEVPKYRDRAKERREDQNPDYEQTELGFHAVAPPGTVDLRSSDAHKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIDKKPDAGDDGDGKSRPSKEDQQVSIRTATAKSVYQWIVKPQTISKTNEMFLPGRMTFIYNMEGGYHHDIPTTLHRSKADCPVPEEMVTVNVDGSVLDRIAKIMSYLRLGSSGKILKKKKKEKDAKGKILAVGNGYDKEDKPSKFEGGAKNQIEKEIIPPPPPPIKKNPLHSREKQGPAVAREEDDDIFVGEGVDYEVPGKDLSQSPVSEDMEESPRNKEKPSYFTEPAYGPVPPSMLPQGWQETNGYDVMQTQALAGGYQGEWQEYQYAEQLAYPDQYLQQNMQTYDVQAGLNLPQDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREIVDSDDEDDLSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNDLHKINKILARKKMEKDTNGEGGHHYDDEPTPGKKLRI	566

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca08g01330	566	MobiDBLite	consensus disorder prediction	103	122	-	-
	Cca08g01330	566	Pfam	RED-like protein N-terminal region	5	221	IPR012916	-
	Cca08g01330	566	PANTHER	RED PROTEIN IK FACTOR CYTOKINE IK	5	565	IPR039896	-
	Cca08g01330	566	MobiDBLite	consensus disorder prediction	540	566	-	-
	Cca08g01330	566	Pfam	RED-like protein C-terminal region	443	549	IPR012492	-
	Cca08g01330	566	MobiDBLite	consensus disorder prediction	103	127	-	-
	Cca08g01330	566	MobiDBLite	consensus disorder prediction	236	252	-	-
	Cca08g01330	566	MobiDBLite	consensus disorder prediction	1	44	-	-
	Cca08g01330	566	PANTHER	PROTEIN RED	5	565	-	-
	Cca08g01330	566	MobiDBLite	consensus disorder prediction	236	343	-	-
	Cca08g01330	566	MobiDBLite	consensus disorder prediction	269	288	-	-
	Cca08g01330	566	MobiDBLite	consensus disorder prediction	1	61	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca08g01330	K13109		-	gmx:100775354	1033.09

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca08g01330	08	40020643	40028643	Cca08g01330	08	40020643	40028643	ECH