Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01309 ATGGCCTCATGGAAGAAAACCATCGCCACCCCATTCAAAAAAGCTTGCACTTTCTTTAACCAGCAACCTCCAAGGGACCATAAGAAGTCTCAAACAGCAGAACAAGAGAATCGGATTATGGATCTGCACGGTGAAGTCATGGCATGTGGCTATGAAGATGTTCAAGTTATGTGGTCAATCCTTGATAAGTCAAAATCTTCAGCCTGCAATATAACTTCTTCATGA 225 0.4222 MASWKKTIATPFKKACTFFNQQPPRDHKKSQTAEQENRIMDLHGEVMACGYEDVQVMWSILDKSKSSACNITSS 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01309 74 PANTHER OS01G0778500 PROTEIN 1 74 - -
Cca08g01309 74 PANTHER - 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01309 Cca-Chr8 39434624 39434981 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01309 - - gmx:100779101 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01309 08 39434624 39434981 Cca08g01309 08 39434624 39434981 ECH
Cca11g02611 11 53344103 53345073 Cca08g01309 08 39434624 39434981 PCT