Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01304 ATGGGAGACCAACCATCATCATCATCGTCTTCGAGAACTGCTGATTTCGATGCTCCCCTTCATTTAATCGGATTCGAGTATGAATATTTGTCACCACAAAAAGTCTCTGGCCATCTCCTTGTCACCCATAAGTGCTGCCAGCCATTTAAGGTGCTTCATGGAGGGGTGTCAGCATTAATAGCAGAGTCTTTGGCAAGCGCAGGAGCACACATGGCTTGTGGCTTTCAAAGAGTTGCTGGAATTCAGCTTAGCATCAACCATTTGAAACCTGCAGTCATGGGTGACTTGGTCCACGCAGAAGCTACCCCTTTAAGTGCCGGCAAAACCGTTCAGGTGTGGGAAGTGAGAATCTGGAAGATTGATCCTTCAAACTCACAAAACAGATCCTTGATTTCATCTTCTAGGGTAACTCTACTAAGCAATATGCCTGTCCCTGATCAAGCAAAAGATGCTGCTCTAGCGCTAAAGAAGTTTGCAAAACTCTAA 486 0.4547 MGDQPSSSSSSRTADFDAPLHLIGFEYEYLSPQKVSGHLLVTHKCCQPFKVLHGGVSALIAESLASAGAHMACGFQRVAGIQLSINHLKPAVMGDLVHAEATPLSAGKTVQVWEVRIWKIDPSNSQNRSLISSSRVTLLSNMPVPDQAKDAALALKKFAKL 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01304 161 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 5 161 - -
Cca08g01304 161 CDD PaaI_thioesterase 22 118 - -
Cca08g01304 161 Pfam Thioesterase superfamily 50 121 IPR006683 -
Cca08g01304 161 Gene3D Hotdog Thioesterase 5 141 - -
Cca08g01304 161 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 5 161 - -
Cca08g01304 161 TIGRFAM unchar_dom_1: uncharacterized domain 1 22 128 IPR003736 -
Cca08g01304 161 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 17 136 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01304 Cca-Chr8 39282072 39287187 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01304 K19222 - gmx:100527403 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01304 08 39282072 39287187 Cca08g01304 08 39282072 39287187 ECH