Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01290 ATGGAACCCAGCGAGAAATCCCTCCGCCTCCTCCTCAAATCGTGGCTCTTCCTCACTTATGTCTACTTGTTCATCTACATCTTGCTCTCTTCCGGCGTCATTTTGTACAACAAGTGGGTTCTTTCGCCCAAATACTTCAACTTTCCCCTCCCCATTACGCTCACCATGATCCACATGGGGTTTTCTGGGGCGGTTGCATTTGTCCTCGTGAGGGTCTTTAAGATTGTGACTCCCGTCAAAATGACATTTGAAATATATGCAACTTGTGTGGTACCAATAAGTGCTTTCTTTGCATCAAGTCTTTGGTTTGGTAACACTGCCTACTTGCACATCTCTGTGGCTTTTATCCAGATGCTCAAAGCTCTGATGCCGGTGGCAACTTTCCTTATGGCTGTTTTGTGCGGTACTGACAAAGCAAGGTGTGATGTGTTCTCGAACATGTTGCTGGTCAGTGTTGGAGTTGTCATTTCCTCCTATGGGGAAATTCATTTTAATATAGTTGGTACAGTTTACCAGGTCACAGGCATCTTTGCAGAAGCTTTAAGACTGGTCTTAACGCAAGTTCTTCTGCAGAAAAAGGGGTTGACATTAAATCCTATTACAAGCTTATATTACATAGCTCCGTGCAGTTTTGTGTTTCTCTTTGTGCCTTGGTACCTACTGGAGCAGCCTGTGATGGAAGTTTCACAGATTCAGTTTAATTTTTGGATCTTCTTTTCCAATGCAGTATGTGCTCTAGCCTTGAATTTCTCCATTTTCTTAGTCATTGGTAGAACTGGTGCTGTAACCATCCGGGTCGCTGGTGTGCTTAAAGACTGGATATTGATAGCTCTTTCAACTGTTATATTTCCTGAATCTACAATAACCGGGTTGAATATCATTGGCTATGCTATTGCACTATGTGGAGTTGTGATGTACAATTACATAAAAGTTAAGGATGTCCGTGCCTCTCAATTGCCTGTTGAAAGTATACCTGATCGGATCTCAAAGGACTGGAAATTCGAAAAGAAGTCTTCTGATATTTATGTGCCAGATAACATCGGTGACAATGAGGGAAGCAGTGGAGGCAATGGTTCTGCTTCTGACATGAACATTGATGAAGAAGCACCACTAATTTCATCATCAAGAACCCAACCCTCCCGCACGTCGCACGTCGCTCGTCGCACCGTCGCATCACTGTACAGCTGCACCGCCGCACTGCTGCATAGCCGCACAGCCGCACAGCCGCACCGCTGCACCACTGCATACTCGCACCACCGCACCGCCGCCTCGTCGCACCACCACGCCGTTGCTTCAAGTTATAAGgtgatcaccgTCTCAGAAACAGAGGAGACAGCGTTAGAATTGGAGAAGGGAGGAGTACAAACAGTGGTTAAGGTCCAAATACCATCAACTATAGAGCATAGCGGTAACAATTATCTGCTTCATCTCAGTGTTGGGTTTAGGGTTTTGCAGTTTTGCGTCATAATGATGGATTCTGAAGGATTGGAGAAGAAGATTGAAGAGTTGAAGCTGAAGGAGGAGAATGGAAATGTGCAAACCCAGGCACAAGGGCAATTGCAGATCATCACCTTTTCTGAACTCATCAATGATGTTAGCCTCCATTTTCAGATCATTCGATTTCCCAAACAGATATATGTGTGGATTGGTTACAACACTGCAAAATTGGGACACATGTATGCAGCAGCTACTACTCGTCCTAACAATATGGTATCTGTCACTTCCATACTTGGAGGGGTTTCTGATAATACAGGGTCCGGCATTGCTCATCGATTAGTGTTAAAGACTGGTCTCAACGTAATTTTGTCTTGCAGTATTCCAAAAAATAGCCCCATGATTGAGACAGAAGCTGAGAAAATATTGATAAGGAAACTCATTAGTCTGGGCTATACAAAGTCAAGATTGGGAGCAACATCTTTGTAG 1923 0.4394 MEPSEKSLRLLLKSWLFLTYVYLFIYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFSGAVAFVLVRVFKIVTPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFLMAVLCGTDKARCDVFSNMLLVSVGVVISSYGEIHFNIVGTVYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEQPVMEVSQIQFNFWIFFSNAVCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRASQLPVESIPDRISKDWKFEKKSSDIYVPDNIGDNEGSSGGNGSASDMNIDEEAPLISSSRTQPSRTSHVARRTVASLYSCTAALLHSRTAAQPHRCTTAYSHHRTAASSHHHAVASSYKVITVSETEETALELEKGGVQTVVKVQIPSTIEHSGNNYLLHLSVGFRVLQFCVIMMDSEGLEKKIEELKLKEENGNVQTQAQGQLQIITFSELINDVSLHFQIIRFPKQIYVWIGYNTAKLGHMYAAATTRPNNMVSVTSILGGVSDNTGSGIAHRLVLKTGLNVILSCSIPKNSPMIETEAEKILIRKLISLGYTKSRLGATSL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01290 640 PANTHER SOLUTE CARRIER FAMILY 35 12 365 - -
Cca08g01290 640 Pfam Triose-phosphate Transporter family 21 307 IPR004853 -
Cca08g01290 640 Pfam Proteasome assembly chaperone 4 533 606 IPR032157 GO:0043248
Cca08g01290 640 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 12 365 - -
Cca08g01290 640 MobiDBLite consensus disorder prediction 343 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01290 Cca-Chr8 38813925 38829445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01290 30 387 Organic Solute Cotransporters AT3G17430 83.520 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01290 - - gmx:100812996 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01290 08 38813925 38829445 Cca08g01290 08 38813925 38829445 ECH