Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01277 ATGACTAGATTCCAACTGGCTTTCATCGCTACCCCAGCCCTCGGCAACCTCGTCCCACTCCTCGAGTTCGCCCTCCTCCTAACCAAACACGACCCTAGATTCTCTGCAACCGTTCTCACCATCTCCCTCCCACAACGACCCCTCGTCAACACCTACCTCCAATCCCGCGCCACCTCAGCCACTAACCTACGCCTCCTCCACCTCCCTCCCGTCGACCCTCCCGCACCCGATCACTACCAATCTTCCGTCGCCTTCCTCTCCCTCCACATACACAACCACAAGCACCACGTCAGAAACGCACTCCTCAGCCTCCTCCCCTCCGAGTCCAACAACTCGGTCCCACTCGCCGCCGTCTTCGTCGACATGTTCTGCACCTCCTTCGTCGACGTCGCCGCCGAGCTCTCCGTCCCGTGCTACCTCTTCTTCGCCTCGCCGGCGAGCTTCCTCGGCTTCACGCTCCACCTTCCCCGAGTCGGCTCGGAATCCGAGTTCGAGATTCCGAGTTTCGAAAACCCCGTGCCCCGCGCCGTTTTGCCCAACCTCGTGTTGGACGCGAACGACGGGCTTTCGTGGATGTTACGCCATGCGGGAAGGTACATGGAAACGAAAGGCATCGTGGTGAATACATTGCATGAGCTTGAACCCCACGCGGTTCAGTCACTCTACAATGATTCACGATTACCACGCGTTTATCCAATTGGGCCGGTTCTTGATCTTGTTGGCTCGGCCCAATGGGATCCCAACCCTGCCCAGTACAAGAGAATCATGGAGTGGCTTGATCAGCAGCCTGCGGGTTCAGTCGTTTTTCTCTGCTTCGGTAGCCTGGGAAGCATGAAGGCGAACCAGGTGGGGGAGATCGCGATTGGGCTTGAACGGGCCGGGGTTAGATTTCTATGGGCCTTGCGGGAGCCACCGAAGGCCCAATTAGAAGACCCAAGAGATTACGCAAACGAAGATGCACTACCGGTACCAGAGGGATTTTTGGAACGGACGAGTGGGAAGGGTTTGGTGTGTGGGTGGGTCCCACAAGCGAAGGTGCTGGGTCATGGTTCCGTTGGGGGGTTCGTGTCGCATTGTGGTTGGAACTCGATTCTGGAGAGTTTGTGGCACGGGGTGCCGATTGCCACGTGGCCGGTGTACGCGGAGCAGCAGATGAACGCGTTTCAGATGGTGAGGGAACTGGGATTGGCGGTGGAGATTAGCGTGGATTATAGAGTGGGTGGGGATCTGGTGCGGGCGGAACAAGTGGAGCGTGGCGTGAGGACCCTGATGGAGGGTGGTGATGAGATCAGGAGAAAGGTGAAGGAGATGAGTGGCAAGTGTAGAGAGGCGTTGATGGAGAACGGGTCGTCGTATAATAATCTAGTGTCGCTGATTCAAGAGTTGACAGGTTGA 1395 0.5742 MTRFQLAFIATPALGNLVPLLEFALLLTKHDPRFSATVLTISLPQRPLVNTYLQSRATSATNLRLLHLPPVDPPAPDHYQSSVAFLSLHIHNHKHHVRNALLSLLPSESNNSVPLAAVFVDMFCTSFVDVAAELSVPCYLFFASPASFLGFTLHLPRVGSESEFEIPSFENPVPRAVLPNLVLDANDGLSWMLRHAGRYMETKGIVVNTLHELEPHAVQSLYNDSRLPRVYPIGPVLDLVGSAQWDPNPAQYKRIMEWLDQQPAGSVVFLCFGSLGSMKANQVGEIAIGLERAGVRFLWALREPPKAQLEDPRDYANEDALPVPEGFLERTSGKGLVCGWVPQAKVLGHGSVGGFVSHCGWNSILESLWHGVPIATWPVYAEQQMNAFQMVRELGLAVEISVDYRVGGDLVRAEQVERGVRTLMEGGDEIRRKVKEMSGKCREALMENGSSYNNLVSLIQELTG 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01277 464 CDD GT1_Gtf-like 7 462 IPR002213 GO:0008194
Cca08g01277 464 Gene3D Glycogen Phosphorylase B; 8 455 - -
Cca08g01277 464 PANTHER GLYCOSYLTRANSFERASE 4 463 - -
Cca08g01277 464 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
Cca08g01277 464 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 460 - -
Cca08g01277 464 Gene3D Glycogen Phosphorylase B; 244 443 - -
Cca08g01277 464 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 231 403 IPR002213 GO:0008194
Cca08g01277 464 PANTHER GLYCOSYLTRANSFERASE 4 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01277 Cca-Chr8 38212624 38214248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01277 5 462 Glycosyltransferase AT1G07250 41.597 1.18e-119 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01277 - - gmx:100775567 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01277 08 38212624 38214248 Cca08g01277 08 38212624 38214248 ECH