Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01276 ATGGCGGCTTCTGATCCCAACAAGTTGATCTCCAAAGCCGATAAGCTAACAAGACTCAGTCTCACGAGGTGGAATGCAGATTGGAAAAGTGCTACTGTTCTTTACGAGCAGGCGGCTAATGGGTTTAGAGTTGCCAGGGACTATGTGAACGCCAAAATTGCATATGAGAAAGCTTCCAAAGGACAAGAGATGCTTGCTTCACCTTGGGATGCAGCTAAGCACTTGGAATCTGCTGCTGCTCTGGCAAAGGATCTAAGCAACTGGCAAGAAGTTGGGGACTTCTATCGAAGGGCATCTGAATTGTACATGGAGTGTGGAAGACCACAACCTGCATCAGACGCTCTTGCAAAGGGAGCTCGTGCTTTGGAAGATAGCATGTCTGAAGAAGCTATTCAGCTATATACAGATGCTTGTACAATTCTTGAGGATGATGGAAGAGAACAAATGGCCTTTGATCTTTATCGTGCTGCCACTAATGTTTATATAAAACTTGAAAAATACACAGATGCAGCATCTTTCATGTTGAGATTGGGCTTGGCAGCTGACAAGTGTAACGCTTCCAATAGCCAGTGCAAGGCATATCTTAGTGCAATCATTATCTACCTTTATGCTCACGACTTTAAGCAAGCTCAGCAGTGCTATAATGACTGTTATCAGATTGATGCTTTTGTCAGAAGTGACCAGAATCGTTGTGCCAGCAAGCTACTTGCTGCCTACTCCGATGGAGACGTTGAAGAAATCAAACGTATTGCTCAGTCAAGTACTATTTCAAATCTTGATCATGTGATCATTCGGCTTGCAAGGAAACTTCCAACAGGTGATGTGAGTGCTTTGAAGTCTGACAATGCTGAAGATGAAGAGCAACCACTCGATGAAGATGACCTGACTTAA 891 0.4388 MAASDPNKLISKADKLTRLSLTRWNADWKSATVLYEQAANGFRVARDYVNAKIAYEKASKGQEMLASPWDAAKHLESAAALAKDLSNWQEVGDFYRRASELYMECGRPQPASDALAKGARALEDSMSEEAIQLYTDACTILEDDGREQMAFDLYRAATNVYIKLEKYTDAASFMLRLGLAADKCNASNSQCKAYLSAIIIYLYAHDFKQAQQCYNDCYQIDAFVRSDQNRCASKLLAAYSDGDVEEIKRIAQSSTISNLDHVIIRLARKLPTGDVSALKSDNAEDEEQPLDEDDLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01276 296 MobiDBLite consensus disorder prediction 277 296 - -
Cca08g01276 296 Gene3D Tetratricopeptide repeat domain 2 272 IPR011990 GO:0005515
Cca08g01276 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 2 295 IPR000744 GO:0006886
Cca08g01276 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 2 295 - -
Cca08g01276 296 Pfam Soluble NSF attachment protein, SNAP 5 264 - -
Cca08g01276 296 SUPERFAMILY TPR-like 7 249 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01276 K21198 - gmx:100776112 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01276 08 38120724 38129976 Cca08g01276 08 38120724 38129976 ECH