Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01262 ATGGAAGGAGAATCGGAGAGTGGCAAGCGAAGGAAGGGTTGCACGTTTTGGAAAAATGACTTCCTCCCGGAGGAGTCGTTTAAGAGTTGGGGGAACTACATGAGGGCGCTGAGGGAGACGCCGTGGAGGCTGAAGGATCGGCTGGTGGCGCGGTCGAGTGAGGAGGCGGAGGTGGTGGGGATGAAGGCGCGTAGCAGCCACCAGATGAAGAAGACGCTCAACTGGTGGGACCTCACGTGGTTCGGGATCGGAGCCGTCATCGGCGCCGGAATATTCGTTCTCACCGGCGTCGAGGCCAGGGAGGTCGCCGGCCCCGCGGTCGTCTTGTCCTACGTCGTCTCTGGTATCTCTGCCTTGCTATCAGTTTTCTGTTACACCGAGTTTGCCGTTGAAATTCCCGTCGCAGGTGGGTCGTTCGCGTACTTAAGAGTGGAGCTAGGAGACTTCGTAGCCTTCATAGCCGCGGGGAACATCCTTCTAGAATACGTAGTAAGTTGCGCCGCCGTGGCACGGTCATGGACCTCCTACTTCGCCACCCTCTGCAACAGAAACCCCGACGATTTCCGCGTGGTGCTACGCAACACCAGCCCCGACTACGGCCACCTCGACCCCGTCGCCGTCGTCATCCTCGCCGTCATATGCATCCTCGCCGTCTACAGCACGAAAGGCTCCTCCGTCTTCAACTACATCGCCTCcgtcgtccacgtcatcatcctcgtcttcatcgtcatcgccggcctcctcCACGCCAACCCCCAAAACTACAAACCCTTCGCCCCCTTCGGCGCCCGAGGCATGTTCCAAGCCTCCGCGGTGCTTTACTTCGCCTACGTGGGTTTCGACGCCGTCGCCACCATGGCCGAGGAGACCAAAAACCCCTCCAGGGACATTCCCATCGGCCTCGTCGCTTCCATGTTGATCACAACGGCGTCGTATTGCTTGCTCGCGGCCACGCTGTGCCTCATGCAACCGTTCAACGCCATCGACGTCAACGCGCCGTACTCGGTTGCGTTTAGCGCCGTGGGCTGGGATTGGGCCAAGTACATCGTGGCGTTGGGCGCTCTGAAGGGAATGACCACGGTGCTGTTAGTCAGCGCTGTGGGCCAGGCCCGTTACTTGACCCACATCGCGCGGACCCACATGATGCCTCCTTGGTTTGCCATCGTCGATGAGCACACCGGGACGCCGGTGAATGCTACTATTGCTATGGTCGTGGCTTCTGCCGCTATTGCTTTCTTCACGGACCTTCAGATTTTGTCTAACCTTTTGTCTATTTCCACTCTCTTTATCTTCATCCTTGTGGCGGTTGCGCTTCTCGTGCGAAGGTACTACTCTAGTGGGGTCACCACCAAGGGGAACCAAATCAAGCTCGTCTTGTTCGTTCTGTTGATCGTTCTCTCCTCGTGTGGGATTTCGTGTTTTTGGGCTCTTGATGGTTGGTGGGTTGGGTATGCTGTATTTGGGCCCCTTTGGGCTTTGGCTACCGGTGGGCTTTGGCTTCTTGTTCCAATGGTGAAGCAGCCCAAGCTTTGGGGGGTGCCGTTAGTTCCGTGGCTGCCTTCTATATCTATTTTTATTAACATTTTCCTTCTTGGGTCTATCGATAAGGATTCGTTTGTTAGGTTTGTTATTTGGACGGTGTTTCTATTGGTTTACTATGTCCTCTTCGGGTTGCATGCTTCTTATGATACGGCTAAGGAGTTTGAGATTGAGGCACAGAGTAGTAAGGAGTTGAACAAGATGGAGAATGGGGTAGTGTCTTCTACCTAG 1770 0.5407 MEGESESGKRRKGCTFWKNDFLPEESFKSWGNYMRALRETPWRLKDRLVARSSEEAEVVGMKARSSHQMKKTLNWWDLTWFGIGAVIGAGIFVLTGVEAREVAGPAVVLSYVVSGISALLSVFCYTEFAVEIPVAGGSFAYLRVELGDFVAFIAAGNILLEYVVSCAAVARSWTSYFATLCNRNPDDFRVVLRNTSPDYGHLDPVAVVILAVICILAVYSTKGSSVFNYIASVVHVIILVFIVIAGLLHANPQNYKPFAPFGARGMFQASAVLYFAYVGFDAVATMAEETKNPSRDIPIGLVASMLITTASYCLLAATLCLMQPFNAIDVNAPYSVAFSAVGWDWAKYIVALGALKGMTTVLLVSAVGQARYLTHIARTHMMPPWFAIVDEHTGTPVNATIAMVVASAAIAFFTDLQILSNLLSISTLFIFILVAVALLVRRYYSSGVTTKGNQIKLVLFVLLIVLSSCGISCFWALDGWWVGYAVFGPLWALATGGLWLLVPMVKQPKLWGVPLVPWLPSISIFINIFLLGSIDKDSFVRFVIWTVFLLVYYVLFGLHASYDTAKEFEIEAQSSKELNKMENGVVSST 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01262 589 Pfam Amino acid permease 73 473 IPR002293 GO:0016020|GO:0022857|GO:0055085
Cca08g01262 589 PANTHER CATIONIC AMINO ACID TRANSPORTER-LIKE PROTEIN 8 575 - -
Cca08g01262 589 Pfam C-terminus of AA_permease 511 561 IPR029485 -
Cca08g01262 589 PIRSF AA_transporter 50 510 - -
Cca08g01262 589 PIRSF AA_transporter 494 582 - -
Cca08g01262 589 Gene3D Amino acid/polyamine transporter I 67 502 - -
Cca08g01262 589 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 8 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01262 Cca-Chr8 37646623 37649491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01262 1 567 Organic Solute Cotransporters AT2G34960 59.123 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01262 K03294 - gmx:100785573 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01262 08 37646623 37649491 Cca08g01262 08 37646623 37649491 ECH