Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01260 ATGGGTTGTGTTTGGTCAAGTATTGAAGAGGATGCGAAGGTTGGCACGTGCAAGGAAAGGAAGAAGGCAATTAAACAGTTGGTTAAGATTAGAGGGGAGTTTTCTGATTCCCTATTAGCTTATTTGAAATCATTGAAGAACACTGGTGCTACCCTTAGGCAATTCACTGAGTCTGATTCAATTGAGTTGGAAACTGCCTCTAATGCATCCCCTCTGCTACCGCCTCCGCGGCCTCCTTTTCTTGCTGACAAGACAACAGTGCACGAAGATGAAATACTAGAGAATGATGAGAGCAATGTTCCTCCGCTGCAAATTGATCCAACTTTGAGCTCATTAAGGCTTTTTCGATCCACTGATGGAAAGGAAATGGTAGAACCAGGGGAAGAGGATAATTGGGAAGAAACCAAAACAGAATTTGAGGATGAAGAGGCAGAAGCAGAAGCTGCTGTAATGGCTGAAAAATTGCGTAGGGGCAAGCAACAGTTAATGGGGCCTGTTGATGAAAATTCCTCTGCAATGGATTTGTATAGAAAAGAGACTACAGCTATGCCTGTGGTGGGTCGTAGAAGTGGGAAAACATTGGAGGGTATAGGTAAAGAGTTAGATGATCAATTCCTGCTAGCATCTGGATGTATAAAGGAAATTGCTGTTCTGATTGATATCAGTGGAGGAGATACTATTCTGTGGCAGAATTCTGGGCATCACGATAGGAAGAGAGGCAATTCTGCAAAGGTCTTCAATGTACTGCCATGGAGTAGGTATTCAAAATCACCTCCATCCACCAAAGATGGTGCTGAGTTTTCTGGTCATAGTGAACCATGCAAGCCTGGAGCTCATTGTGCCACACTTAAAAAGTTATATGCAGCAGAGAAGAAACTTTTCAAGGCACTTAAGGAGGAGGGAGTTGCTGCCTTGGAGTTTGATAGGAAGTCCTCATTATTGCGAAAACAAGAGGACGAGAACCTTGACTTGGTCAAGATTGAGAAAACTCGATCAAGTGTTGAGAAGTTGGAGTCCGATTTAATAAGCCTACGGCAGTGCATCAGTGAAACAACTTCATCAATTTTGGAAATTATAGATGAGGAGCTTTTACCCCAGCTGGTTGCATTAACTGCAGGGTTGACACAAATGTGGAGGACAATGCATAAGTCCCATCAAGCCCAAGCACTCATCTCCCAGAAGTTGAGCAACCTCAGTGATAATCATAATACAATACTTAATTCTGAATATCATCCCCAGGCTACAATTCAATTTGAGACTGAGGTCTCTTATTGGTATAATAGCTTTTGCAAACTTATAAAATCTCAGCGGGAGTATGTGAGGACCCTCTCTAAGTGGATTCAGCTTACCAACAGCCTCAGAGATGGTCAAGAATGTAGCAATCACTCTTCTATTCTTACCATTTGTGAACAGTGGGAGCTTGGGCTTAACGGGTTACCCGACAAGGAGACTGCAGATGCAATAAAAAGCCTTTTGTCATCCATCCGTTTGATAATTGCACAGCAGACCGAGGAAGATAACAATCTGAAAAGGTTTAAAAAACTTGAAAGTAAATTCCATAAATGCTTGAACTCCTTGGCTGAGATGCAGCAAAGAATAGATGGAGATATCGCTGATACGCATCCAATACATCATAAGAAAACTGAAACAGAAGCCGTTAAGAAGCAAGTGGAAAATGCGAAAGCAGGTTATTTGGAAGCTGTTCAATATAGTAGGGTCATGACCCTACAGCAACTCCAAACTGGACTTCCCCCTCTCTTCCAGTCACTGATGGAATTTTCAAATGCTTCAGCCCAGGCAATTGAGGTTATCAATACCCCGATGAAGCCAGAAGAATAG 1839 0.4252 MGCVWSSIEEDAKVGTCKERKKAIKQLVKIRGEFSDSLLAYLKSLKNTGATLRQFTESDSIELETASNASPLLPPPRPPFLADKTTVHEDEILENDESNVPPLQIDPTLSSLRLFRSTDGKEMVEPGEEDNWEETKTEFEDEEAEAEAAVMAEKLRRGKQQLMGPVDENSSAMDLYRKETTAMPVVGRRSGKTLEGIGKELDDQFLLASGCIKEIAVLIDISGGDTILWQNSGHHDRKRGNSAKVFNVLPWSRYSKSPPSTKDGAEFSGHSEPCKPGAHCATLKKLYAAEKKLFKALKEEGVAALEFDRKSSLLRKQEDENLDLVKIEKTRSSVEKLESDLISLRQCISETTSSILEIIDEELLPQLVALTAGLTQMWRTMHKSHQAQALISQKLSNLSDNHNTILNSEYHPQATIQFETEVSYWYNSFCKLIKSQREYVRTLSKWIQLTNSLRDGQECSNHSSILTICEQWELGLNGLPDKETADAIKSLLSSIRLIIAQQTEEDNNLKRFKKLESKFHKCLNSLAEMQQRIDGDIADTHPIHHKKTETEAVKKQVENAKAGYLEAVQYSRVMTLQQLQTGLPPLFQSLMEFSNASAQAIEVINTPMKPEE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01260 612 PANTHER REDUCTASE SUBUNIT C, PUTATIVE (DUF630 AND DUF632)-RELATED 1 610 - -
Cca08g01260 612 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Cca08g01260 612 Pfam Protein of unknown function (DUF632) 197 496 IPR006867 -
Cca08g01260 612 Coils Coil 129 149 - -
Cca08g01260 612 PANTHER UNCHARACTERIZED 1 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01260 Cca-Chr8 37623014 37631641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01260 1 88 Acyl Lipid Metabolism Gene Families AT2G27090 34.091 3.13e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01260 - - gmx:100809759 902.123