Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01250 ATGCAAGTGATGAAGTCTGCCACACAAGTAGAGccaacaccacaaccaccattatcactaccacaaccGTCATCATCATCGTCATCGTTGTCGTTAGGGCTTCACATGATGAGGCCCTATGAGATGGTGCACCACCTGGTGTCATGCAACGCCGTGGTGGTGTTTAGCATGAGCGACTGCTGCATGTCCACCGTGGCCAAGCGCCTCCTCTTCAGCCTCGGCGTCGGCCCCACCGTCGTGGAGCTCGACGAACAGGCCGATGGTTCCGGCATCCGGTCAGTCCTTTACCAGTTTTCCGGGACACACCAGCCTGTCCCCGCCGTCTTTGTCGGCGGCAAGTTTCTCGGTGGGGTGCAAACCCTAATGGCCAGCCACATAAACGGCACTCTGGTGCCTCTCCTCAAAGAAGCTGGGGCTCTATGGCTCTGA 429 0.5338 MQVMKSATQVEPTPQPPLSLPQPSSSSSSLSLGLHMMRPYEMVHHLVSCNAVVVFSMSDCCMSTVAKRLLFSLGVGPTVVELDEQADGSGIRSVLYQFSGTHQPVPAVFVGGKFLGGVQTLMASHINGTLVPLLKEAGALWL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01250 142 PANTHER GLUTAREDOXIN 33 142 IPR011905 -
Cca08g01250 142 Gene3D Glutaredoxin 37 141 - -
Cca08g01250 142 TIGRFAM GlrX-like_plant: glutaredoxin-like family 43 142 IPR011905 -
Cca08g01250 142 CDD GRX_GRXh_1_2_like 51 133 - -
Cca08g01250 142 SUPERFAMILY Thioredoxin-like 40 141 IPR036249 -
Cca08g01250 142 MobiDBLite consensus disorder prediction 1 26 - -
Cca08g01250 142 Pfam Glutaredoxin 52 114 IPR002109 -
Cca08g01250 142 PANTHER GLUTAREDOXIN-C9 33 142 - -
Cca08g01250 142 ProSiteProfiles Glutaredoxin domain profile. 40 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01250 Cca-Chr8 37033228 37033656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01250 41 142 Miscellaneous Gene Families AT4G15700 47.059 5.97e-28 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01250 K03676 - gmx:100775537 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01250 08 37033228 37033656 Cca08g01250 08 37033228 37033656 ECH