Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01031 ATGTTCTCCCAAGGGGGTTTGTGGCAGATGAGCATCAAAAATAAATGCTCAAATGCCTCTCCTTCAAATCATCCACCTCATCCTCCACAGTCCAAAACCCCTCCCAAGATGAAACACCCAGCATCTCTGGCGAaccacacccaccccaccccacGCGACTGCGACCGCGCCCTCCAACTCTTCCACCCCTTCCAAACCCTCCAAAACCCTATCCCCGATTCCAACACCTTCTCCGCCGTCCGCGCCTCCCTCTCCGCCCTCAAAACcctcctccaccgccgcgccgccgcctccctctcccgcctccgcctcttccgccgcgccctccgcggctccgcaatctgcctcgtcgccgtcgccgtcgccgtcattgccgccaccgtcgcagccaccgtgcacgccgccgtcacgctagctgccgccgccggtgctgctgctgcgccgGTTTGTGGCTCTGAGAGGAGAGAACTTGCGAGGCTGAGGCAGCTTGATGCTGCTACGAAATGCGCTTTTGTGTTGAGCAATGACCTCGCCACCATCGACGCCCTGGTGGCGCGGCTTCGCGCCACCGTGGAGGGGAATAGGGTTCTGGTGAGGCTTGGGTTGGAGAGGGAGAATGAGAGGTACCTTGTGCAGGAAGTAATCAAGCAGCTCTGGAAGAGTCACCAGGGGCTTTTGCGCCAGATTGAGGAACTTGAGGAGCATATATTCCTATGCTTTTATAACATTAACAAGGCTAGACTCTTGGTTCTTCAAGAGATATGCAAGTTTGTTCTGTACTATGATCTTTTGCCATGCATAGATTCCAGCTTATCTGCAGATATTATTAAGAAATGCAACCGTGAGATCTTGGAATGGTAG 861 0.3914 MFSQGGLWQMSIKNKCSNASPSNHPPHPPQSKTPPKMKHPASLANHTHPTPRDCDRALQLFHPFQTLQNPIPDSNTFSAVRASLSALKTLLHRRAAASLSRLRLFRRALRGSAICLVAVAVAVIAATVAATVHAAVTLAAAAGAAAAPVCGSERRELARLRQLDAATKCAFVLSNDLATIDALVARLRATVEGNRVLVRLGLERENERYLVQEVIKQLWKSHQGLLRQIEELEEHIFLCFYNINKARLLVLQEICKFVLYYDLLPCIDSSLSADIIKKCNREILEW 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01031 286 Pfam Protein of unknown function (DUF677) 64 254 IPR007749 -
Cca08g01031 286 MobiDBLite consensus disorder prediction 14 49 - -
Cca08g01031 286 PANTHER UPF0496 PROTEIN 3-RELATED 50 255 IPR007749 -
Cca08g01031 286 PANTHER OS04G0405700 PROTEIN 50 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01031 Cca-Chr8 26124192 26128838 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01031 - - var:108344357 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00735 07 11296649 11297862 Cca08g01031 08 26124192 26128838 PCT