Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00946 ATGGGTGTGATTGATTTTTGCAACTCTTCTGCTTTGTACTGGGTCAAGTCCAACACCAATCTGAAACAACAAGTGGGGTTGGCACCCAGACCCATTTGTTCATTTGAGGGGAATCAGAGGAAGTTTGTAGCCATGGCTTCCACCATTCCTGTGGAGCAAGTCAACAATGGTCCTGTGAAAGTGACAGGTGACTCCTTCATCAGAGAGCATCTGAGGAAGTTGGCTCCTTATCAGCCCATTTTGCCTTTTGAGGTTTTATCAGCTCGTCTTGGACGTAAGCCTGAGGATATTGTCAAGCTAGATGCTAATGAAAATCCTTATGGTCCCCCTCCAGAGGTCATGGAAGCCCTAGGTTCAATACAATTTCCATATGTCTATCCTGATCCAGAAAGCCGCAGCTTGCGTGCAGCTCTTGCCCAAGATTCAGGCCTTGAAGCTGAATATATTCTTGCAGGATGTGGTGCAGATGAGCTTATTGATTTGATAATGCGTTGTGTACTTGATCCTGGAGACAAGATTGTGGACTGCCCTCCGACCTTCACAATGTATGAATTTGATGCTGCAGTTAATGGAGCACTTGTTATCAAAGTTCCAAGGAGGCCGGACTTCAGCTTGAATGTAGAAGAAATTGTTGAAGTTGTTAAACAAGAGAAGCCCAAATGCATATTTTTAACATCTCCAAATAATCCAGATGGAAGTATAATTGATGATGAAGTTCTCTTAAAGATACTTGAGCTTCCCATACTGGTGATATTGGATGAAGCATACATCGAGTTTTCAGCAATTGAATCAAGAATGACTTGGGTGAAGAAACATGAGAATTTGATTGTTCTTCGGACATTTAGCAAACGAGCTGGTTTAGCTGGACTTAGAGTGGGATATGGAGCTTTTCCTTTGAGTTTAATTGAGTATCTTTGGAGAGCAAAGCAGCCATATAATGTATCTGTTGCTGCTGAAGTTTCTGCATGTGCAGCATTGCAAAATCCTACCTATCTAGAGAATGTAAAAAATGCTTTGCTCAAAGAAAGAGGGAGGCTTTTTGACCTTTTGAAGGAAGTTCCATTCCTTCGGCCATTTCCAAGCCATTCTAATTTCATTCTTTGTGAGGTTACATCTGGAAAGGATGCAAAGAAGCTAAAGGAGGACCTCGCACAAATGGGTGTGATGATTCGTCACTACGACAAGAAAGAGCTGAAAGGGTACGTTCGTGTAACTGTTGGGAAGCCTGAGCAAACAGATGCACTTATGAAGTGCCTCAAGAGACTGTTGTAA 1272 0.4245 MGVIDFCNSSALYWVKSNTNLKQQVGLAPRPICSFEGNQRKFVAMASTIPVEQVNNGPVKVTGDSFIREHLRKLAPYQPILPFEVLSARLGRKPEDIVKLDANENPYGPPPEVMEALGSIQFPYVYPDPESRSLRAALAQDSGLEAEYILAGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGALVIKVPRRPDFSLNVEEIVEVVKQEKPKCIFLTSPNNPDGSIIDDEVLLKILELPILVILDEAYIEFSAIESRMTWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPLSLIEYLWRAKQPYNVSVAAEVSACAALQNPTYLENVKNALLKERGRLFDLLKEVPFLRPFPSHSNFILCEVTSGKDAKKLKEDLAQMGVMIRHYDKKELKGYVRVTVGKPEQTDALMKCLKRLL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00946 423 Hamap Histidinol-phosphate aminotransferase [hisC]. 66 423 IPR005861 GO:0000105|GO:0004400
Cca08g00946 423 PANTHER HISTIDINOL-PHOSPHATE AMINOTRANSFERASE 45 422 - -
Cca08g00946 423 SUPERFAMILY PLP-dependent transferases 76 423 IPR015424 -
Cca08g00946 423 TIGRFAM hisC: histidinol-phosphate transaminase 68 421 IPR005861 GO:0000105|GO:0004400
Cca08g00946 423 Gene3D - 126 327 IPR015421 GO:0003824
Cca08g00946 423 Pfam Aminotransferase class I and II 96 416 IPR004839 GO:0009058|GO:0030170
Cca08g00946 423 CDD AAT_like 98 421 - -
Cca08g00946 423 Gene3D Aspartate Aminotransferase, domain 1 95 416 IPR015422 GO:0003824
Cca08g00946 423 PANTHER HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATED 45 422 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00946 K00817 - gmx:100784293 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00946 08 22334919 22344004 Cca08g00946 08 22334919 22344004 ECH