Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00847 ATGCTATCAAAATTATTAAGAGCTCGTAAGGCACGCCAAGATGCCAAGCAACAAATTAGTGATTCCCCCAGAAGTGTAAATTTCCACGAGGAGTACCACAGGGTTTTAAGGACAAAATCCTATGCTGATTTCTTTAACAAAGCTCAAATACTTGCAAGCCAACCTTCCATTTTTTTCAACCAGAATAAATTTTCAGAAATTCTCCTAGAACCAAGCCAAGAAACTATACATTCCATTATTGACACACCAATCCTTTCAAAGACACCAGAACTAAAGAATCTCATGCTAAGCTACTTTGAAATCAGTGCTGAGGTTTCACTCATTTGCAGCTATGTTCTCAAAACAATCAACCAAGTCCAGTGTAATTATCATTTCATTGAAAGAGCCCTAGACATCATGGATGGTGTTGATGACTCTCCAGAAAAAGTCAAACTAATCATTTTTGAGCTCAACTCATTCATCTTCTCAAATAACCCTTTTTCAGACCTCAACAATCATGACTTCAAGCTCATTAGTGGTAAGCATTCATTAGTGTTGCATAGTTTGACATCAATGAGAAAAAGGATGGGAAGGAAAGTTAAGCTAATGACATATTTGAAGGAGACATCAGAAACTTGTGTTAAAGTAGCATGTGGCTTAGTGCCTATCACAACAAATGTTATAGCAACACATATTTTAGCTGCACCAACCATGGGGCAAACAATTCTTGGTTTTCCATGTACTGAGAGACTTAAGAGGAAGCTTCCACACTTGAGGTTTTCAAGAAAGTTTCTTAGTAAAGTTTGTGATCAGCTTGACATAGCATCCAAGGGAACTTACATATTAAATAAAGACTTTGATACAACGAGTAGAGTTGTGGCTCGGCTTTGTGATGAAATTGAACACAACAGAGCAATGGTGCAACTCTGTTTGGACAAGAAAGATGATAAATTCTCTTTGCAGATAGTGAAGGAGCTTAAGAAAAGTGATGCTGGGTTTTGGAGACTGGTGGAAGAACTTAAAGAGCATGTGTACTTGTGCCTTGTGAATATTAACCAAGCAAGATGTTTGCTTATTAATGAAATGACATAA 1071 0.3716 MLSKLLRARKARQDAKQQISDSPRSVNFHEEYHRVLRTKSYADFFNKAQILASQPSIFFNQNKFSEILLEPSQETIHSIIDTPILSKTPELKNLMLSYFEISAEVSLICSYVLKTINQVQCNYHFIERALDIMDGVDDSPEKVKLIIFELNSFIFSNNPFSDLNNHDFKLISGKHSLVLHSLTSMRKRMGRKVKLMTYLKETSETCVKVACGLVPITTNVIATHILAAPTMGQTILGFPCTERLKRKLPHLRFSRKFLSKVCDQLDIASKGTYILNKDFDTTSRVVARLCDEIEHNRAMVQLCLDKKDDKFSLQIVKELKKSDAGFWRLVEELKEHVYLCLVNINQARCLLINEMT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00847 356 Pfam Protein of unknown function (DUF677) 58 352 IPR007749 -
Cca08g00847 356 PANTHER UPF0496 PROTEIN 3-RELATED 7 356 IPR007749 -
Cca08g00847 356 PANTHER OS04G0423200 PROTEIN 7 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00847 Cca-Chr8 18761500 18763778 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00847 - - gmx:121173698 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00847 08 18761500 18763778 Cca08g00847 08 18761500 18763778 ECH