Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00740 ATGTTTCTCCGAGCGGTGGCGCGGCCGCTGATGGCGAAGGTGAAGGCTTCGACGGGGATCGTGGGTCTGGACGTGGTGCCGAACGCGAGGGAGGTGCTGATAGGGCTCTACAGCAAGACTTTGAAGGAGATCGAGAAGGTTCCAGAAGACGAAGGGTACCGCAAGGCGGTGGAGAGCTTCACGAAGCACAGGCTCAGCGTCTGCCAGGAGGAGCAGGACTGGGAAGCCATCGAGACACGCCTCGGTTGCGGCCAGGTCGAGGAACTCATCGAAGAGGCTCAGGATGAACTCAAACTCATTTCCTACATGATCGAGTGGGATCCTTGGGGTGTTCCAGATGATTACGAATGTGAGGTGATTGAGAACGATGCACCAGTTCCCAAGCATGTTCCTCTCCACCGACCTCCTCCTCTCCCTAAAGAATTTCACAACACACTAGAGGCACTTGCATCTCAATCGGGAAAAGATACTCCTGCTGTCAACTCTAGTGAATCACCATCAAAGGCATGA 510 0.5471 MFLRAVARPLMAKVKASTGIVGLDVVPNAREVLIGLYSKTLKEIEKVPEDEGYRKAVESFTKHRLSVCQEEQDWEAIETRLGCGQVEELIEEAQDELKLISYMIEWDPWGVPDDYECEVIENDAPVPKHVPLHRPPPLPKEFHNTLEALASQSGKDTPAVNSSESPSKA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00740 169 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT 1 164 IPR006806 GO:0022904
Cca08g00740 169 Pfam ETC complex I subunit conserved region 22 88 IPR006806 GO:0022904
Cca08g00740 169 PANTHER BNAA02G10640D PROTEIN 1 164 - -
Cca08g00740 169 MobiDBLite consensus disorder prediction 146 169 - -
Cca08g00740 169 MobiDBLite consensus disorder prediction 132 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00740 Cca-Chr8 14007857 14013755 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00740 K03949 - gmx:100526984 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00740 08 14007857 14013755 Cca08g00740 08 14007857 14013755 ECH