Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00735 ATGATGATAATCGAGCCTGCCATCGCCGTTCGTTTCCAcgccggttccggcgccgccgctcgctccgccgccgcACCATATCATAACCGTTCAATGTGGAGCGCTGAAGACGTGAACGGTGTGCGTTATGTTGCGTCGTGCCGGCTCGCGTGCAGCTGCGGTTTCGACGTGCCTTGGGTAAGAAGTCAAAAATACACAAGCATTCCGTTCACAAGAAGAAATAAACTTGCAAAGAATAGAATTAGGGCTTCATCAGAGCATCTGGGATCTCAGGATCCTGTAAAGAAAAATGAGAAGCCATCCTATCATCCATTTGAAGAAGTTGCTGCGTCAACATCAGAGAATAGTGAAGATGCTAGACTTACTGCAGCAGAAACAAGTAGAACAATTATTGAGGTTAACAGCAAAGCAACACTGATGTTCTCAAGTTTGATTAGTGATGAATTTCATGAAAATATTATCTGGCCAGATTTGCCTTATTTGACTGATGAACATGGAAATATATACTTTCAAGTGAAGAACAGTGAAGATGTTTTGCAATCTCTAACTTCAGAAAATAATTTTGTGCAAGTCATTGTAGGTGTGAATTCAATGGAAATGATCTCCGAGATGGACTTATCAGGTCCTTCAGAAATTGACTTTGGGATCGAAGAAATTGATGATCAAGATACTGAGGATTTAGATGACAGCAATGAAGAGgatgaagacgaagatgaagatgaagatgagaatgaagatTATGATTCGGAATGGGTGGCTGTTTTTTCGgatgatgatgagcaagaagacgatgatgaAACACTTGCAGACTGGGCAAAATTGGAGACTATGCAATATTCTCATCCAATGTATTTTGCCAAAAAGTTGGCAGAGATTGCTTCAGATGATCCAGTTGATTGGATGGAGCAGCCTCCAGCTTGTGTGGCTATCCAAGGGGTTATAAGACCTGCTTTTGTTGAAGAACATTCTACAATACAGAAGCATTTATCTACCAATCAATCCAGTGATACCAACAAAAGTAAATCCATAGAAAGTAAAGGGGAAAATATTGGTGTGATTAATGGTCATGTGCTTAATTCAGGATCTTCTGGAGATAATGCAGCACAGCAGGTGGAAAATGACTCTAATAGTGATAGCATCCCCTTTAGTGAGACTTCATTTTACAAATTGGAGATGATTAAGATTCAAGTGTTTTCTGCACAAGGAAATCCTACTGCCCTTGAAATAGAAGACTACGTGAAAGCCCAACCCGATGCTATTGCACACTCTGCTTCTAAAATCATATCTCGTTTGAAAGTTGATGGAGAAAACACCTTGCAAGCCCTTAAGTCCCTGTGTTGGAGATGCAAGGGCCTTCAAGTGGAGATGGCTTTTAGAAATGGTGGTAGCACACCACAATCTTTATAA 1407 0.3724 MMIIEPAIAVRFHAGSGAAARSAAAPYHNRSMWSAEDVNGVRYVASCRLACSCGFDVPWVRSQKYTSIPFTRRNKLAKNRIRASSEHLGSQDPVKKNEKPSYHPFEEVAASTSENSEDARLTAAETSRTIIEVNSKATLMFSSLISDEFHENIIWPDLPYLTDEHGNIYFQVKNSEDVLQSLTSENNFVQVIVGVNSMEMISEMDLSGPSEIDFGIEEIDDQDTEDLDDSNEEDEDEDEDEDENEDYDSEWVAVFSDDDEQEDDDETLADWAKLETMQYSHPMYFAKKLAEIASDDPVDWMEQPPACVAIQGVIRPAFVEEHSTIQKHLSTNQSSDTNKSKSIESKGENIGVINGHVLNSGSSGDNAAQQVENDSNSDSIPFSETSFYKLEMIKIQVFSAQGNPTALEIEDYVKAQPDAIAHSASKIISRLKVDGENTLQALKSLCWRCKGLQVEMAFRNGGSTPQSL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00735 468 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 457 - -
Cca08g00735 468 PANTHER CREG1 PROTEIN 1 457 - -
Cca08g00735 468 MobiDBLite consensus disorder prediction 354 379 - -
Cca08g00735 468 MobiDBLite consensus disorder prediction 83 102 - -
Cca08g00735 468 MobiDBLite consensus disorder prediction 327 346 - -
Cca08g00735 468 MobiDBLite consensus disorder prediction 219 248 - -
Cca08g00735 468 MobiDBLite consensus disorder prediction 355 379 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00735 - - gmx:100797899 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00735 08 13877373 13884685 Cca08g00735 08 13877373 13884685 ECH