Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00734 ATGTCATCAACCACAAGCAGCACCAACATGAGCGATGTCGATCGCTTATTCGCGTGTTTCAAGTGCGGTTTAACCCCTCCCAAATCCGCCACGAGGGAAAGAAAACGAAGCAAAAGGGGATTGGAGCAGGAGAGTTCAAAGCATGAATTTCCATCAGAATCTCCAGGTCCAGGACAAGTTGGAGGAGAACTGAAAACTCCCTTATCACGCATCAGAAAAACCAACGTTGAATCTTCCATTGAGAAACTTAAATCAGCAGTAGCCAGAAAATCTCAAAGCATTGGTCGTGGGAAGCAGTTCTCTCCAATTGTATTTTATGGATCTCCTCATGGCGTCCCTCCCAAAAGGCCAACTCGTATATTGTGGCGACTGTTACGTGAGATATGTCCTGATCTCTCTCAGCAAAAGAAATTGAACATAAGGAGGGAAGTTTGGATGACATTCCCAAGGCAGGATGAAGCAATGAAGTTTGCCAAAGGACAAGAAGATGTTCATGTTTTCAGCTATCAAGACCATTGTAATGGCCAAAGAAGGTTCCTTGTATGTACATATAAAGAATTCTGGCGAAGGTACAAGAATATGGATCCCAAATTTCGTCATCATTATGAAGTGATTCAAGAGGGTTTACCATGCCACCTTTATTTTGATTTGGAGTTTAATAAGAAAGTCAACATAGGAAAGAATGGAGAAGAAATGGTTGATCTCTTGATATCAGTAGTTCTAGAAGCCTTACGTGAAAAATATGCAATCCATGGAGACCACAATTGGGTAGTAGAACTTGATTCTTCAACTGAAGATAAGTTCTCTCGCCATATAATAGTTCGCATACCAAAGGTTGCATTTAAGGACAACTCTCATGCAGGTGCATTTGTTTCAGAAATATGCTCAAGAATTCTAAATGCAAGGGGAGAAGATAAAAGTTTCGAAAAATTGCTTGTAATGAAAGATTCTAGCAGCAATGAATCTGCAGGCCAACTTTTTGTGGATACTGCTGTATATTCCCGGAATCGTTGTTTCCGTCTTCTTCTTTCTTCAAAAGCAGGAAAAAGTTCAGTTCTTCTACCAACAAAGCGTTTTAAGTGCAAGGACTTGGGTGAAGAAGACATGTTCATGGCTTCCTTGATCTGCAATATGGATGTCGATTGCAAAACGTTTCTGGTCTGCAAAACAGACTTAGATTGCGTAAAAACTCTGCATTTTGATACAGAGGAAAATAGTAATGTTGGAAATTCTTGCCATATTCCTTCGGAATTTACATTGGATACTAGAAAAAGTGAAGTTTCAACTACATATTTCATGGGAAAGTCACCATTCCCATTTCTAGACAAATTTATACTCTCAGTTGCCTCTGTCGGGAATATACCAGGAAAAATTCAAAGCTGGTATTTTTTCTCGGAATTTGGACTCATGGTCTACAGTATGACAAAAAATAGATACTGTGAACGAATTGGCAGACAGCATAAAAGCAATAATGTCATATACGTGGTTGATCTACGAATGGCCGTTTATTATCAGAAATGTCATGATCCAGAATGCAGAGGTTACCGATCTCCCATGCGACAAATCCCAGTTCATGTGTTCTCCAATCCTTCAGATGTAATTGATTCCTTTGGGTTGTTAGACGATGAACAGCCAGTTGATGATAAATGGAGACATCAACTTGATGATAACAAGGAACAAAGTTCTCTACAATACGAAGACATTGTTGCGGACAATTCCAACGATTCTTGGTGGTTAGAAGCCATAAGAGTTGTTGAGGATATGGAGAATAAGCAAACACAGACAGAGCTAAGCACTATGCAGGAAGTAATTGATGATGAAGATGAGGAGTGGTGGCTGGCTGCAGAAAAAACTGCATCCCAGGCTGAACTAAACTGCTTCAGTCAACAAGAATTTTGTGCCACAGGATTACCAGCTGATTCCACAAGCGAACTGTGA 1938 0.4009 MSSTTSSTNMSDVDRLFACFKCGLTPPKSATRERKRSKRGLEQESSKHEFPSESPGPGQVGGELKTPLSRIRKTNVESSIEKLKSAVARKSQSIGRGKQFSPIVFYGSPHGVPPKRPTRILWRLLREICPDLSQQKKLNIRREVWMTFPRQDEAMKFAKGQEDVHVFSYQDHCNGQRRFLVCTYKEFWRRYKNMDPKFRHHYEVIQEGLPCHLYFDLEFNKKVNIGKNGEEMVDLLISVVLEALREKYAIHGDHNWVVELDSSTEDKFSRHIIVRIPKVAFKDNSHAGAFVSEICSRILNARGEDKSFEKLLVMKDSSSNESAGQLFVDTAVYSRNRCFRLLLSSKAGKSSVLLPTKRFKCKDLGEEDMFMASLICNMDVDCKTFLVCKTDLDCVKTLHFDTEENSNVGNSCHIPSEFTLDTRKSEVSTTYFMGKSPFPFLDKFILSVASVGNIPGKIQSWYFFSEFGLMVYSMTKNRYCERIGRQHKSNNVIYVVDLRMAVYYQKCHDPECRGYRSPMRQIPVHVFSNPSDVIDSFGLLDDEQPVDDKWRHQLDDNKEQSSLQYEDIVADNSNDSWWLEAIRVVEDMENKQTQTELSTMQEVIDDEDEEWWLAAEKTASQAELNCFSQQEFCATGLPADSTSEL 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00734 645 PANTHER DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN 73 593 IPR044917 GO:0003887|GO:0003896|GO:0042276
Cca08g00734 645 Pfam Herpesviridae UL52/UL70 DNA primase 464 524 - -
Cca08g00734 645 MobiDBLite consensus disorder prediction 23 71 - -
Cca08g00734 645 Coils Coil 590 610 - -
Cca08g00734 645 MobiDBLite consensus disorder prediction 28 49 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00734 K22761 - gmx:100789800 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00734 08 13855653 13870592 Cca08g00734 08 13855653 13870592 ECH