Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00728 ATGGATAAGATATACATCAATAAAATATCCCTTCTCCAACCAAACACATCCACAGAAGCCATGAAAACTCTCATAATTTGTGCACCAAACGCCACTCTCAATCTCTCAAAACCTTCTCCAAGGAAACAAAACTTGCCACTTATTCATGCAGAAAAACTCAAGCAACCCTTGATCACATCAAAGCCACCACGTGCGAGTGCTAAGGGCTTTTCTTCTCCATCCGTTGCAAGTGATGTTGACAAGAAGGAGAAGCCCATGAGAAAGAAAAACAAGGACGATGAGGACCTTCCAACGTCAGTTATGTACAGGATAATTCGCAGGATCTTGGTCTCCGTTGTGGTGCCAATGGGGTTGGGTTTGGCCTTCTTGCACCTCTTCGGGGAGCTTAAGGAAAACAAAGTCTACGATGCCCCATTGTGGTTGCCCTTCGTCACAACACTCTTGACATTCGGAGCTTCCAGTATTGGGATTGCGTATGGGACACTGTCCACCAGTTTGGAGGAAGAGAAGGAAGGTTCGTTTCTTGGGTTCGAACAGGTTCAGAAGAATTGGGTTGAGATGTGGCaagaagaagaagatgaagaTGCAACTTAG 594 0.4428 MDKIYINKISLLQPNTSTEAMKTLIICAPNATLNLSKPSPRKQNLPLIHAEKLKQPLITSKPPRASAKGFSSPSVASDVDKKEKPMRKKNKDDEDLPTSVMYRIIRRILVSVVVPMGLGLAFLHLFGELKENKVYDAPLWLPFVTTLLTFGASSIGIAYGTLSTSLEEEKEGSFLGFEQVQKNWVEMWQEEEDEDAT 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00728 197 Pfam Photosynthesis affected mutant 68 55 190 IPR021855 -
Cca08g00728 197 MobiDBLite consensus disorder prediction 60 94 - -
Cca08g00728 197 PANTHER EXPRESSED PROTEIN 21 194 - -
Cca08g00728 197 PANTHER PROTEIN PAM68, CHLOROPLASTIC 21 194 IPR021855 -
Cca08g00728 197 MobiDBLite consensus disorder prediction 77 94 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00728 - - ccaj:109804476 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00728 08 13783060 13783800 Cca08g00728 08 13783060 13783800 ECH