Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00701 ATGGGTTCTCGCTACGAGGTGGAACTCAAACTCGCATCGGCTCGCGGCATGAAAAACGTGAACTGGCGCCACGGCGCCAATCGCCCATACGTCGTCGTTTGGGTCGACGCAAGCAACAAGCTTTCCACGCGCGTCGACGAAAACGGCGACACCGACGCCGATTGGGACCAAACGCTTACAATTCCGCTTCCACCCAAGCCCCTGGAGGATCAAACGCTCTACATCGACGTCGTCCACGCCGGCTCAGAGGAAGACACCAAGCCGTTGATCGGCTCGGCTCGGCTCAAGCTCGCCGAGGTTCTCGACGAGGGGATCGGCTCACGCGTGAGCCGATCCCTTACCCTGAAGCGTCCCTCGGGGAGGCCACAGGGAAAGGTTGAGGTTAGCGTGACGATCAGACAGCCGAGCTATCATGCGCCGGGTGGCTACCCTGCGCCTGGGTACGGCGTGAGGGATTATTCCCCTGCGCCGCAGGGCTATGGGTACCAGTACGGTGCACCGCAGCAGGGAGCGTATTATTCTGCGGCTCCGCCTGCAGGGTATCCTCAGCAGGGAGGCTACCCTTATAATGCGGCTCCTCAAACGGCGTCGTATGGGCAAGGGAGCGCGTACGGGTACGCGCCTGAGGAGAAGAAGAAGAGTAAGTTTGGGGGAATGGGGACGGGATTGGCTGTGGGCGCGGTTGCTGGGGTTCTAGGTGGAATTGCATTGGTGGAGGGTGCGGAGTACATCGAGGACAAGATTGCTGATGACGTGGCGGAGAGGGTTGAGGATGATCTTGGTTACGATGACTTTTAG 798 0.6003 MGSRYEVELKLASARGMKNVNWRHGANRPYVVVWVDASNKLSTRVDENGDTDADWDQTLTIPLPPKPLEDQTLYIDVVHAGSEEDTKPLIGSARLKLAEVLDEGIGSRVSRSLTLKRPSGRPQGKVEVSVTIRQPSYHAPGGYPAPGYGVRDYSPAPQGYGYQYGAPQQGAYYSAAPPAGYPQQGGYPYNAAPQTASYGQGSAYGYAPEEKKKSKFGGMGTGLAVGAVAGVLGGIALVEGAEYIEDKIADDVAERVEDDLGYDDF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00701 265 SMART C2_3c 6 109 IPR000008 -
Cca08g00701 265 PANTHER PROTEIN SRC2-LIKE 1 262 - -
Cca08g00701 265 CDD C2_SRC2_like 6 128 IPR044750 GO:0006952
Cca08g00701 265 Pfam C2 domain 7 103 IPR000008 -
Cca08g00701 265 PANTHER INGRESSION PROTEIN FIC1 1 262 - -
Cca08g00701 265 Gene3D C2 domain 4 137 IPR035892 -
Cca08g00701 265 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 133 IPR035892 -
Cca08g00701 265 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00701 Cca-Chr8 13186316 13188081 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00701 - - gmx:100817630 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00701 08 13186316 13188081 Cca08g00701 08 13186316 13188081 ECH