Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00693 ATGTGGTGGTTGGCCAGAAAAGGAGCTTCTGGGTTCTCAGGTTCTTCTACTGCTGAGGAGGTTACCCAGGGAATTGATGGCTCTCGCCTCACTGCCATTGTTACAGGGGCAACTAGTGGTATTGGTGTTGAAACTGCACGTGTAATTGCATTACGCGGTGTCCATGTAGTCATGGGGATCAGAAATATGGCAGCTGGTGGGGAGATCAAGGACACAATATTAAGAGATAACCCAACTGCAAAAATTGACATGATGGAGCTGGACCTAAGCTCAATGGAATCAGTGAGGAAATTTGCATCACAATTCAATTCTCGTGGTCTTCCACTGAATATACTTGTTAATAATGCAGGAATCATGGCAACACCGTTCAAGCTTTCCAAAGATAATATAGAATTACAATTTGCAACAAATCACATTGGCCATTTCCTTTTGACAAACTTATTGGTGGAAACAATGAAGAGGACTGCTATTGAACAGAAGAAGGAGGGAAGGGTCGTAAATGTCTCATCAAGACGTCATAAATTATCATATCCTGAAGGGATAAGATTTGATAAAATCAATGATAAATCAGGGTAA 576 0.4132 MWWLARKGASGFSGSSTAEEVTQGIDGSRLTAIVTGATSGIGVETARVIALRGVHVVMGIRNMAAGGEIKDTILRDNPTAKIDMMELDLSSMESVRKFASQFNSRGLPLNILVNNAGIMATPFKLSKDNIELQFATNHIGHFLLTNLLVETMKRTAIEQKKEGRVVNVSSRRHKLSYPEGIRFDKINDKSG 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00693 191 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 179 IPR036291 -
Cca08g00693 191 Gene3D - 25 191 - -
Cca08g00693 191 Pfam short chain dehydrogenase 31 179 IPR002347 -
Cca08g00693 191 PANTHER RETINOL DEHYDROGENASE 2 190 - -
Cca08g00693 191 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 2 190 - -
Cca08g00693 191 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Cca08g00693 191 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Cca08g00693 191 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00693 Cca-Chr8 12909410 12912280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00693 33 170 Acyl Lipid Metabolism Gene Families AT1G62610 30.137 4.70e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00693 - - gmx:100775556 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00693 08 12909410 12912280 Cca08g00693 08 12909410 12912280 ECH