Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00649 ATGAGAGAGAACAACGTTGTGATCACGAGGCAAGAGAATTACGGATCGGGGCATTCTCGTCATTACAAGGACGCAATCTGGTGGCCGTTCATGAAATCGCTGTCGAGATCCTCCGCGGTTATCGCCTTCTCCGTCGTGCTCATCGTCGGCGCGTTGGTTTACACGCGCACGCTCGACACACATCCCATAATTTCGGGAGGTTCATCGACGAAATCAGCACTGGGCACATCCACATACCAAGTGTTCCGCGCGCAAATAGAAACCCCAGTGAACTGCAGCGCGTACAACCACACCCGAACATGCCCCAGAAACGGCGGGCACGAAAAGGGGAGCGAGGAGAGGGTCGGAGCGAGCGCCACGTGTCCGGAGTACTTCCGGTGGATCGACGAGGACCTGCGGGCGTGGGCGCGTACCGGAATAACGCGGGAGATGGTGGAGCGGGCGAGGGCGACGGCGAACTTCAGGGTGGTGATCCTGAACGGGAGGGCGTATTTGGAGACCTACGAGAAGGCGTTTCAGACGAGGGACGTTTTCACGCTCTGGGGGATTCTGCAGATGCTCAGAAGGTACCCTGGGATGCTTCCCGATTTCGAGCTCATGTTTGATTGCGTCGATTGGCCCGTCGTCTCCGCCGATCGCTACGCCGGCCCCAATGCCGGGCCCCCGCCCCCTCTCTTCCGCTACTGTGGGAATGATGACACATTGGACATTGTCTTCCCTGATTGGTCTTACTGGGGATGGCCTGAGGTTAACATAAAGCCATGGGAGATTTTGTTGGGAGAGTTGAAAGAAGGCACCAAGAGGATACCATGGCTGAACAGAGAGCCGTATGCTTACTGGAAAGGTAATCCAACAGTTGCTGAAACAAGGCAGGATCTCATGAAATGCAATGTTTCTGACAAACAAGAATGGAATGCTCGTTTGTATGCTCAGGATTGGGGACGAGAATCACAAGAAGGGTACAAGAAATCAGACTTGGCAAGCCAATGCACTCACAGATATAAAGTGTACATTGAAGGTTCTGCTTGGTCAGTGAGTGAAAAATACATTCTGTCATGTGACTCTGTCACTTTACTTGTAAAACCCCATTACTATGATTTTTTCACAAGAGGGCTGATTCCGACCCACCACTATTGGCCCATAAAGGAAGATGACAAGTGCAGGTCCATTAAGTTTGCTGTGGATTGGGGTAACAATCACAAGCAAGAGGCACAAAATATTGGCAAGGCAGCAAGTGATTTCGTTCAAGAAGAGCTAAAGATGGATTACGTGTACGACTACATGTTTCATCTCTTAAATTCATATGCTAAACTGTTCAAATACAAACCCTCTATAGGTGTTAATGCTACTGAACTATGTGTGGAGTCTATGGTTTGTGGAGCAGAGGGAACAGTAAAGAAATTTATGATGGAATCATTGGTGAAGGGTCCTTCAAACACCAGCCCTTGCACCATGCCTCCCCCTTACGACCCTCCATCTTTGCAAGCGCACTTAAAGAGGAAGGAAGATTCAATTCAACAAGTTGAATCATGGGAAAAAAGTTACTGGGAAAAGCAAAATAGGAAATCTTAA 1572 0.4962 MRENNVVITRQENYGSGHSRHYKDAIWWPFMKSLSRSSAVIAFSVVLIVGALVYTRTLDTHPIISGGSSTKSALGTSTYQVFRAQIETPVNCSAYNHTRTCPRNGGHEKGSEERVGASATCPEYFRWIDEDLRAWARTGITREMVERARATANFRVVILNGRAYLETYEKAFQTRDVFTLWGILQMLRRYPGMLPDFELMFDCVDWPVVSADRYAGPNAGPPPPLFRYCGNDDTLDIVFPDWSYWGWPEVNIKPWEILLGELKEGTKRIPWLNREPYAYWKGNPTVAETRQDLMKCNVSDKQEWNARLYAQDWGRESQEGYKKSDLASQCTHRYKVYIEGSAWSVSEKYILSCDSVTLLVKPHYYDFFTRGLIPTHHYWPIKEDDKCRSIKFAVDWGNNHKQEAQNIGKAASDFVQEELKMDYVYDYMFHLLNSYAKLFKYKPSIGVNATELCVESMVCGAEGTVKKFMMESLVKGPSNTSPCTMPPPYDPPSLQAHLKRKEDSIQQVESWEKSYWEKQNRKS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00649 523 MobiDBLite consensus disorder prediction 479 501 - -
Cca08g00649 523 Pfam Glycosyl transferase family 90 118 512 IPR006598 -
Cca08g00649 523 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 32 521 - -
Cca08g00649 523 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 32 521 - -
Cca08g00649 523 SMART cap10 193 442 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00649 Cca-Chr8 11810740 11821633 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00649 - - gmx:100800365 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00649 08 11810740 11821633 Cca08g00649 08 11810740 11821633 ECH