Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00625 ATGAATAGGGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAAACCTGTGAGGCAGAAAATTACTGAGCCTAAGACTCCATATCATCCTATGATTGATGATGACAGTTCTCTATCCCCTGTACGTGGAAGTTTTGATGCATGTATTGACGATGGAAATCACACAACGCAAGCTGAAGCAATATGGAATGCTCTTAATGATGTAGCCTCCAGTAGCAGAAGAGGCACTGGACAATCTGGTGGTTGGACATCATCTGAAGATGAGCCAGAAGCAATGGAGCAAGATGATGATGATTCTGAAACAGATAGGAGTTTAAGTTTTAAAGAGCACAGAAAGGCCCACTATGATGAATTTCTTAAAGTGAAAGAGATGCGACAGAAGGGTTCTCCTATTGAGGATGAAAGTGACGAGGATAATAATTCTGAACCTTGTAAGGCGGAGAAATGTGAATCATCTTCGCTGAGTGATGGTGTAAAAGAGATGGACATTGAGGGGAAGAAGTCTTCAAGGCCAGCTAATGGTTCTACGACAGTGATCAACAAATAA 561 0.4189 MNRGRVRWDEANIGEIEANKPVRQKITEPKTPYHPMIDDDSSLSPVRGSFDACIDDGNHTTQAEAIWNALNDVASSSRRGTGQSGGWTSSEDEPEAMEQDDDDSETDRSLSFKEHRKAHYDEFLKVKEMRQKGSPIEDESDEDNNSEPCKAEKCESSSLSDGVKEMDIEGKKSSRPANGSTTVINK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00625 186 MobiDBLite consensus disorder prediction 106 139 - -
Cca08g00625 186 MobiDBLite consensus disorder prediction 19 44 - -
Cca08g00625 186 PANTHER PHOSPHOPROTEIN PHOSPHATASE INHIBITOR 3 158 - -
Cca08g00625 186 PANTHER PROTEIN PHOSPHATASE INHIBITOR 3 158 IPR007062 GO:0004864|GO:0009966|GO:0043666
Cca08g00625 186 MobiDBLite consensus disorder prediction 73 90 - -
Cca08g00625 186 MobiDBLite consensus disorder prediction 73 186 - -
Cca08g00625 186 MobiDBLite consensus disorder prediction 157 172 - -
Cca08g00625 186 Pfam Protein phosphatase inhibitor 2 (IPP-2) 6 141 IPR007062 GO:0004864|GO:0009966|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00625 Cca-Chr8 11299411 11307206 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00625 K16833 - gmx:100500286 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00625 08 11299411 11307206 Cca08g00625 08 11299411 11307206 ECH
Cca08g00625 08 11299411 11307206 Cca02g02277 02 43284492 43286921 PCT