Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00588 ATGAGTTGCAAAATAAACTCCTTGAGCCCACCATTTCCATGCAAATTGTGCACCAAGAAATCAAAGTTTagaagaagaagaagaagCACTATCTTCTTTTCCTTTTCAAGTGAAAAACAGGAAAATACCATTTCCACAAGTATTGAACCCTCAACAACCGAGTCTTACACTGTCAGTTTCAAGACAGAAAAGGGTTGCAAGCTTGAAATTTCAAGGTATCCTGACTTTGAGTATGATGCTGAAGGGGGAATAGGAACTGGAGTTGGTGCGAAGGTCACAGAGAATTCAACCGAAAGTGACCTTCCTGTTTCATTTGATCTTGAAACTTTGTATATTCCACCACTAACAAGTTCTACAACCAAGTTTCTTGGATTGCCATTGCCACCATTTTTGAAGATTGATATAGTTCCACAAGCATTCCAAGGAAGTATTAACCAAGAATCTGGCAAGGTTGATCTTGAGTTCAAGGCCAGATTCATTTTTTCTGCTGGTAGTCTCTATAAGGCTGCCCCACTGCTGGTGAAGACAGTGTTGACATCTGAAGAATCAAAGGGCATTGTGAAGAGTGGAAGAGGCAAGAGATTGGATAAAGAGGGAAAATGCAGACTGGTTGGTGTGGCAACAGTTGATCCTATTGATGATTTCCTTATGAATTCCTTTCTTGGTCTTCCAACTGAGTGCCTTGCTGACTTAAAGGCTGTAATCTCCATTTCTTCCTCATCTTAA 726 0.3953 MSCKINSLSPPFPCKLCTKKSKFRRRRRSTIFFSFSSEKQENTISTSIEPSTTESYTVSFKTEKGCKLEISRYPDFEYDAEGGIGTGVGAKVTENSTESDLPVSFDLETLYIPPLTSSTTKFLGLPLPPFLKIDIVPQAFQGSINQESGKVDLEFKARFIFSAGSLYKAAPLLVKTVLTSEESKGIVKSGRGKRLDKEGKCRLVGVATVDPIDDFLMNSFLGLPTECLADLKAVISISSSS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00588 241 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00588 Cca-Chr8 9981448 9983161 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00588 - - gmx:100527109 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00588 08 9981448 9983161 Cca08g00588 08 9981448 9983161 ECH