Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00551 ATGGGCGACAAGGGTGACACATCCAAGAaacaacaacaaccaccacagcagcaacaacctcaatctctccatcaccaccaacagcaacaacaaactcaacaacaacaaccacaaacacagcaaATTTCATCTTCTCCTCAAGCCCCACGTGAGGAATTACCACCCATCACAGAAGTTAGGTCAATCCACCACCAACAACAACAGACACCAGTTGTGGTTGTAACTGGAGCACCCCCTTTCATTTCAAGTCCTCTATATGTTTCCAGTGGTGCAAGTTCCTCACCCTTTGACCCTCAGTTTGAGTCACTCAACCCCAAGAGGCCTAGATACAGTGGACAATGGAAGCAACTTCTACCATCTCCATCTGCAAAACAAAAACAGTCCCAAATGGCCATGCTTCCCACCACGGAATCAAGCCCTTCACCAACCACACACGCCTCATCAAACCCTCAACAACCCCAAACACAACCGGCTTCTTCATCAGACACCACTGCTTCATCTCCAACTCACTCCCCCATGCCTAGTTCAGGCCATGAAGGGACCAAGCAAGAGGGAGAACAAGTTCACCAGCAACTCAGAAAGGGGAAGTACGTGAGCCCAGTTTGGAAGCCCAACGAGATGCTGTGGCTAGCAAGGGCTTGGAAGGAGCAATACCAAGGTGGTGGTGGTGGATCTGAATCTTCTTCAAGAGCAGAACAACAAGGAGAATTGGGAATCTCGAGAGGGAAAACCAGGGCTGATAAAGATAGAGAAGTTGCCGAATTTCTCAGGAGGCATGGGGTGAATAGAGATGCCAAAACTGCAGGGACGAAATGGGATAACATGTTGGGAGAGTTTAGGAAAGTGTATGAATGGGAAAGAGGGGGTGAGAGGGAACAAATTGGGAAGAGCTATTTCCGGCTTTCACAGTATGAGAGAAAGTTGCATAGGCTCCCAGCTTCTTTTGATGAAGATGTTTTCGAAGAGCTTTCTCAGTTCATGGGGTCTAGAATGAGATCCTCTCATGGCAGAGCTGGTTCCTCTTTTGTGTCAGGAGATGAAGCTAGATCGGCTCTTGCTGCTACAAGAGCTCTTCTACCTCCTCCTCGATCTCTCAAAGACGATGAAGCAACCCCTCATTCAGGAAGGACAAAGCAATTGGCTTTGACAAGTGGGGGTGAACCTTTCTTTCAGGGCTCAAGAGGGGGTTTATTAGGGTTAGAGTCTCTCTTGGACGTTTCAGGCTCTTCTTCATCATCGAGGGAACCACTCCGAAGAATGGGGAAGATAAGAATGACGTGGGAGGAATCAGTGAGTTTGTGGGCAGAAGAAGGTGAAGTTCACAGAGGGAGAGTGAAGCTTCAATCTTCGAGTTTTCTGAATGCAGATGAACTCACTTGCTTTGACGATGCCATGGTGCCTTGTCCCATGGAATATTTCGAAGATGGTCCTTTGAAGGGTTTCTCTGTTGACAGATTCGTTTCGGGACAGCAAGTTAAAGTTTTTGGCAGAAGAAAGGCTTCCCCGGCCTCGGCTTCTTCTGGTTTAGCTGAAAGAGTCCAACTTCCCTCCAAAGCACTTCCCATAAGATCCATTGGCACATTGGATTTCCGAGACCCAACAGAATACTACATGGAATGTCTCCTACGTGCATCATCCCCGCAAACGCTCCCAACCCTCTTCGACCTAAGGCGCCACCTCCAAGACCCGCCACCGGAGGAGCTCCGCTTTCCCCTCCGCCGCGAGGTCTACGACGACCTCCCTCAGGGAAAAGAACTCTTCTTCACTTCCGCCACCGAGCCCTTGGATTGCAGAACCCTAATGCACGACATCGTGGGCCCCATCATCCGCACCCACCCTAGCCCCACAATCCCCACTTCCCGCGACTCCTTCATCCCTCTCTGGGACGATTGCGTCAACCGAGTCATCGCGAGATTCTGCCCCGAAGAAATGAAAATAATCCGAAAACCCTCGTTAAAGGACACCGCCAAAACCCTAATCCAAGACCAGTGGCCCAACGTAACGGGATTCGTGAACAACTTCTGCTTATGGCGCGGCGAGGAAACGGATCGGTTGAAAGAGTCGCAACCGGATCCATCGAGCACGCTGGTCGGAAAATTACTCTGGAGTTACATGGATCTCCCTTATGTTCTAGGTTATTACGCAGTGGCCAATACGGTGACGTTTTGCGCGTTGAGCAGGTCGCACGAGGGGGTGAATCTAATCAACCGTACGGATTTGTTGGAGTTGAATTTGAGTAATCCGATGGAGAGGTTGAAGTGTTTGGTTCCGTGTTTCAGGATTGGGGTGTTGTTGGCGATGTTGAGTAAGCATTGTGCGAAGGGGGGTATATATAGCGATTTCGAGAGGGTTAGTTACGGTAACGGAGTGGTGACGGAGTTGACGCCGAACACGTGCACTCGGGTGTTTTGGGAGAAGCGGAAGTGGATGGCCGTTAAGGAGGTGTACGAGATTCTCGACCACAGGATTCCGCACGCGGAGATTCTGGTGGGGAGTTCGGAGGGGGAGCTGACGTTGTCGTTTCGGCCGCGGGGGTGTCGTTTGAGGCCGGGGAGTTTTGAGGAGCTGGTGGAGGCGTTGAAGTGCGTGACGAAGGCGCTGGTGGCGCTGCACGACTTGTCGTTTATGCATAGGGACTTGAAGTGGGAGAAGGTGATGCGGCGCGTGGACGGGGAGGAGTGGTTTGTGTGCGG 2693 0.4946 MGDKGDTSKKQQQPPQQQQPQSLHHHQQQQQTQQQQPQTQQISSSPQAPREELPPITEVRSIHHQQQQTPVVVVTGAPPFISSPLYVSSGASSSPFDPQFESLNPKRPRYSGQWKQLLPSPSAKQKQSQMAMLPTTESSPSPTTHASSNPQQPQTQPASSSDTTASSPTHSPMPSSGHEGTKQEGEQVHQQLRKGKYVSPVWKPNEMLWLARAWKEQYQGGGGGSESSSRAEQQGELGISRGKTRADKDREVAEFLRRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQIGKSYFRLSQYERKLHRLPASFDEDVFEELSQFMGSRMRSSHGRAGSSFVSGDEARSALAATRALLPPPRSLKDDEATPHSGRTKQLALTSGGEPFFQGSRGGLLGLESLLDVSGSSSSSREPLRRMGKIRMTWEESVSLWAEEGEVHRGRVKLQSSSFLNADELTCFDDAMVPCPMEYFEDGPLKGFSVDRFVSGQQVKVFGRRKASPASASSGLAERVQLPSKALPIRSIGTLDFRDPTEYYMECLLRASSPQTLPTLFDLRRHLQDPPPEELRFPLRREVYDDLPQGKELFFTSATEPLDCRTLMHDIVGPIIRTHPSPTIPTSRDSFIPLWDDCVNRVIARFCPEEMKIIRKPSLKDTAKTLIQDQWPNVTGFVNNFCLWRGEETDRLKESQPDPSSTLVGKLLWSYMDLPYVLGYYAVANTVTFCALSRSHEGVNLINRTDLLELNLSNPMERLKCLVPCFRIGVLLAMLSKHCAKGGIYSDFERVSYGNGVVTELTPNTCTRVFWEKRKWMAVKEVYEILDHRIPHAEILVGSSEGELTLSFRPRGCRLRPGSFEELVEALKCVTKALVALHDLSFMHRDLKWEKVMRRVDGEEWFVC 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00551 897 MobiDBLite consensus disorder prediction 360 385 - -
Cca08g00551 897 MobiDBLite consensus disorder prediction 115 181 - -
Cca08g00551 897 MobiDBLite consensus disorder prediction 1 197 - -
Cca08g00551 897 PANTHER OSJNBA0043A12.37 PROTEIN-RELATED 96 897 - -
Cca08g00551 897 PANTHER GB|AAB80672.1 96 897 - -
Cca08g00551 897 MobiDBLite consensus disorder prediction 85 100 - -
Cca08g00551 897 MobiDBLite consensus disorder prediction 7 50 - -
Cca08g00551 897 MobiDBLite consensus disorder prediction 221 235 - -
Cca08g00551 897 MobiDBLite consensus disorder prediction 217 247 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00551 - - var:108344133 1307.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00551 08 8983837 8988587 Cca08g00551 08 8983837 8988587 ECH