Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00532 ATGGAGAGTGTTCTAAGCCAAATTGGTGCAGGTTTCTGCAATGGCATGACCCCATCAAAGGGTTTGGCTGAGATCAAAAGGGGTGTTCTAGGTGCCCCTTTGAAGGGTTGTTCCTTTGGTGGGAGAGCAAGGCGCGTAGTGTTGGTGAAAGCTGAGGCTGTGAGCATAAACCCTGATATCAGGAAGAGTGAAGAGAAGGTGGTGGATTCTGTGGTGGTCACTGAACTCTCCAAGCCACTTACTGCTTATTGCAGGTGCTGGAGATCAGGGACTTTTCCGCTTTGTGATGGAAGCCATGTAAAGCACAACAAAGCCACTGGAGATAATGTTGGGCCTCTTCTTTTGAAAAAGTAA 354 0.4802 MESVLSQIGAGFCNGMTPSKGLAEIKRGVLGAPLKGCSFGGRARRVVLVKAEAVSINPDIRKSEEKVVDSVVVTELSKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00532 117 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 42 117 - -
Cca08g00532 117 SMART znf_cdgsh 66 105 IPR018967 GO:0043231|GO:0051537
Cca08g00532 117 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 42 117 IPR045131 GO:0010506|GO:0051537
Cca08g00532 117 Gene3D - 72 117 IPR042216 -
Cca08g00532 117 Pfam Iron-binding zinc finger CDGSH type 71 99 IPR018967 GO:0043231|GO:0051537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00532 K23882 - gmx:100783951 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00532 08 8682648 8685075 Cca08g00532 08 8682648 8685075 ECH