Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00422 ATGCCTGTGAACCCTAAGAAAGGGGTTATCAGGGTTTCTACTGACTTGAACATCAAAACCTCCCTTAAGACAAGTTGTAGTGAATCCACCGTGTGGAAGCTTGATGCTTTTGATGATTCAACTCGACAGTGGTTTGTAACCACTGGTGGTGTTTTGGGAAACCCTAGCGTGGACACACTCAGCAATTGGTTCAAGATTGAGGAGTATGATGATGATTACAAGCTTGTTTTCTGCCCCACAGTGTGCAACTATTGCAAGCCTTTGTGTAAGAATGTTGGGGTGTTTAGGGATAGTAATGGGAACCAGCGTGTGGCTCTCACTGATGAACCTTACAAAGTTAGGTTCCAGCCATCTACTTGA 360 0.4444 MPVNPKKGVIRVSTDLNIKTSLKTSCSESTVWKLDAFDDSTRQWFVTTGGVLGNPSVDTLSNWFKIEEYDDDYKLVFCPTVCNYCKPLCKNVGVFRDSNGNQRVALTDEPYKVRFQPST 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00422 119 SMART kul_2 2 119 IPR002160 GO:0004866
Cca08g00422 119 PANTHER KUNITZ TRYPSIN INHIBITOR 2 2 118 IPR002160 GO:0004866
Cca08g00422 119 PANTHER LIPID TRANSFER PROTEIN 2 118 - -
Cca08g00422 119 Pfam Trypsin and protease inhibitor 4 116 IPR002160 GO:0004866
Cca08g00422 119 Gene3D - 1 117 - -
Cca08g00422 119 SUPERFAMILY STI-like 5 117 IPR011065 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00422 Cca-Chr8 6436997 6437745 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00422 - - gmx:100306134 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00422 08 6436997 6437745 Cca08g00422 08 6436997 6437745 ECH