Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00412 ATGAAGACCACACTCTTAGCATTTGTTCTTCTCTTTGCCTTGAGCTCACGACCACTCCTTGGATCAGCTGAAGCTTCACCTGACCAAGTGGTAGACACATCAGGCAAGGTGCTCCGGGTTGGTGTCAACTACAAAATTCTTCTGTCCATGCCCTACACTACTTGTAGAAGTCCACAAGGCCTTGGCCTCTCATCAAAGATTGGTAAATCATCATGCCCTCTTGATGTTGTGGTTGTGGATAGATATCATGGCTTGCCACTAAGGTTTATACCTATTAACCCCAAAAAAGGTGTTATTCGTGTCTCTACTAACCTCAACATCATCATGTTCCCTCCTAATGTGAGTTGCCCTCACCATTCCACAGTGTGGAAGATTGACATTTCTAATGTTTCTAAGGGACAGTGGTTTGTGACTACTGGTGGTGTTGTGGGAAAACCGGGTAGGGAAACCATTGGCAATTGGTTCAAGATTGAGAAGTATGATGGTGCTTATAAACTAGTATATTGTCCCAGTATGTGCCCTTCTTGCAAGAATGATCAGTGTAAGAATGTTGGGATGTTTGTGGATCATAAGGGAAACCAGCGTTTGGCTCTAAGTGATGCTCCCTTCCAAGTTAAATTCCTTAAGGCCTAA 633 0.4376 MKTTLLAFVLLFALSSRPLLGSAEASPDQVVDTSGKVLRVGVNYKILLSMPYTTCRSPQGLGLSSKIGKSSCPLDVVVVDRYHGLPLRFIPINPKKGVIRVSTNLNIIMFPPNVSCPHHSTVWKIDISNVSKGQWFVTTGGVVGKPGRETIGNWFKIEKYDGAYKLVYCPSMCPSCKNDQCKNVGMFVDHKGNQRLALSDAPFQVKFLKA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00412 210 SUPERFAMILY STI-like 26 210 IPR011065 -
Cca08g00412 210 CDD STI 29 209 IPR002160 GO:0004866
Cca08g00412 210 PANTHER KUNITZ TRYPSIN INHIBITOR 2 1 207 IPR002160 GO:0004866
Cca08g00412 210 PANTHER LIPID TRANSFER PROTEIN 1 207 - -
Cca08g00412 210 Gene3D - 20 210 - -
Cca08g00412 210 Pfam Trypsin and protease inhibitor 30 209 IPR002160 GO:0004866
Cca08g00412 210 SMART kul_2 29 210 IPR002160 GO:0004866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00412 Cca-Chr8 6270230 6270979 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00412 - - gmx:100779308 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00412 08 6270230 6270979 Cca08g00412 08 6270230 6270979 ECH