Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00411 ATGAAGAACATATATCTGGCATTTGTGCTTCTCATTGCCTTGAGCTCACAACCACTACTTGGTGCAGCTGATGCATCACCTGAGCAAGTAGTAGACACATCAGGCAAGAAACTCCGAGCTGGTGTGGGTTACTACATTGTTCCAGCTGTGCCCTTCACAAGATGTGGAAGGTACGGAAGATGCATTAGTGGTGGAGGCCTTTCACTTGCCAGCATTGGTGAATCATGCCCTCTTGATGTTGTTCTTGTGCCAGGATCTCATGGCTTGCCACTCACATTTTCACCCGTTGACCCTAAGAAAGGTGTTGTTCGTGTCTCCACTGATTTGAACATCATGTTCTCCACTGATCGTACCAGTTGTCCTGAGTATTCTACAGTGTGGAAATTGGATCACTTCGATGTCTCTAAAAGACAGTGGTTTGTGACCACTGGTGGCTCTTTGGGCAAGCCAGGTTGGCAAACCATACGCAACTGGTTCAAGATCGAGAAGTTTGATGGTGCTTATAAGATTGTTTACTGTCCCAGTGTGTTTCCATCTTCCAATCATATGTGCAAGGATGTTGGTGTCTTTGTGGATCAGAATGGGTATAGGCGTTTGGCTCTAAGTGATGTTCCATTCAAAGTCAAGTTTCAGCTGGCATAA 642 0.4564 MKNIYLAFVLLIALSSQPLLGAADASPEQVVDTSGKKLRAGVGYYIVPAVPFTRCGRYGRCISGGGLSLASIGESCPLDVVLVPGSHGLPLTFSPVDPKKGVVRVSTDLNIMFSTDRTSCPEYSTVWKLDHFDVSKRQWFVTTGGSLGKPGWQTIRNWFKIEKFDGAYKIVYCPSVFPSSNHMCKDVGVFVDQNGYRRLALSDVPFKVKFQLA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00411 213 Pfam Trypsin and protease inhibitor 30 211 IPR002160 GO:0004866
Cca08g00411 213 SMART kul_2 29 213 IPR002160 GO:0004866
Cca08g00411 213 PANTHER LIPID TRANSFER PROTEIN 1 211 - -
Cca08g00411 213 SUPERFAMILY STI-like 26 211 IPR011065 -
Cca08g00411 213 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 29 58 IPR002160 GO:0004866
Cca08g00411 213 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 158 177 IPR002160 GO:0004866
Cca08g00411 213 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 182 211 IPR002160 GO:0004866
Cca08g00411 213 PANTHER KUNITZ TRYPSIN INHIBITOR 2 1 211 IPR002160 GO:0004866
Cca08g00411 213 Gene3D - 25 213 - -
Cca08g00411 213 CDD STI 29 211 IPR002160 GO:0004866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00411 Cca-Chr8 6268577 6269332 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00411 - - gmx:100779841 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00411 08 6268577 6269332 Cca08g00411 08 6268577 6269332 ECH