Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00410 ATGAAGGTCTTAGCAATATTTTGCCTCATTTGTTTTGCCTTCACATTCTTCATTGTTACAACTGGTGCAGCACCTGAGCCAGTGCTTGACACCTCAGGCCAGAAACTGATCACAGGAGTCAAGTACTATATTTTGCCAGTCACAAGAGGCAAAGGTGGTGGCCTAACAGTTGCAAGCACCAGTGCTAACAATGACACGTGCCCCCTCTTTGTGGTTCAAGAGAAGCTTGAAGTGTTGAAGGGCACCCCAGTTACTTTCACACCCTACAATGCCAAAACTGGTCTCATACTAACATCAACTGATCTCAACATCAGGTCCTATGTCACAAGTAGTACTTGTGCCAAACCCCCAGTGTGGAAGCTCCTCAAAGTGCTAACTGGGGTGTGGTTTTTGAGCACTGGTGGTATTGAGGGCAATCCAGGAATTGACACCATTGTGAACTGGTTCAAGATTGAGAAGGCTGAGAAAGACTATGTGCTCTCTTTTTGTCCCTCAGTGTGCAAATGCCAGACTTTGTGCAGGGAACTTGGGATTTATGTTGATGATGATGGTTACAAGCATTTGTCTCTTAGTGATAAGGTTCCATCCTTCAGGATTATGTTCAAGAGGGCCTAA 615 0.452 MKVLAIFCLICFAFTFFIVTTGAAPEPVLDTSGQKLITGVKYYILPVTRGKGGGLTVASTSANNDTCPLFVVQEKLEVLKGTPVTFTPYNAKTGLILTSTDLNIRSYVTSSTCAKPPVWKLLKVLTGVWFLSTGGIEGNPGIDTIVNWFKIEKAEKDYVLSFCPSVCKCQTLCRELGIYVDDDGYKHLSLSDKVPSFRIMFKRA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00410 204 SMART kul_2 27 204 IPR002160 GO:0004866
Cca08g00410 204 PANTHER KUNITZ TYPE TRYPSIN INHIBITOR / MIRACULIN 6 204 - -
Cca08g00410 204 CDD STI 27 203 IPR002160 GO:0004866
Cca08g00410 204 Gene3D - 22 204 - -
Cca08g00410 204 Pfam Trypsin and protease inhibitor 28 203 IPR002160 GO:0004866
Cca08g00410 204 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 27 56 IPR002160 GO:0004866
Cca08g00410 204 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 67 87 IPR002160 GO:0004866
Cca08g00410 204 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 148 167 IPR002160 GO:0004866
Cca08g00410 204 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 171 200 IPR002160 GO:0004866
Cca08g00410 204 SUPERFAMILY STI-like 24 202 IPR011065 -
Cca08g00410 204 PANTHER KUNITZ TRYPSIN INHIBITOR 2 6 204 IPR002160 GO:0004866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00410 Cca-Chr8 6265271 6266228 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00410 - - gmx:100789630 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00410 08 6265271 6266228 Cca08g00410 08 6265271 6266228 ECH