Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca08g00399 | ATGAGTTCGCGGGGAGCGGCGGCGGTGCTATCGAGGGCGAGCAGGATAAGGTCGAAGCTGCAATCGGCGCTGGAAGCCACCGTTCTGGAGGTGGACGACGTGTCGCACCAGCACGCGGGCCACGCCGCCGTGAGGGGAAGCTCCGACATGGAAACCCACTTCAACGTGAAGATCGTGTCCCCCAAGTTCGAGGGCCAGAGCCTCGTCAAACGACACCGCATCGTCTACGACCTCCTCGCCGACGAGCTTCAGTCCGGTTTGCACGCCCTCTCCATCGTCGCCAAGACGCCCCGCGAAAccaaccccaaccccaaccccaaccccGCCGACTGA | 333 | 0.5916 | MSSRGAAAVLSRASRIRSKLQSALEATVLEVDDVSHQHAGHAAVRGSSDMETHFNVKIVSPKFEGQSLVKRHRIVYDLLADELQSGLHALSIVAKTPRETNPNPNPNPAD | 110 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca08g00399 | 110 | Pfam | BolA-like protein | 20 | 99 | IPR002634 | - | |
| Cca08g00399 | 110 | SUPERFAMILY | BolA-like | 11 | 101 | IPR036065 | - | |
| Cca08g00399 | 110 | PANTHER | BOLA-LIKE PROTEIN 1 | 7 | 100 | - | - | |
| Cca08g00399 | 110 | PANTHER | - | 7 | 100 | - | - | |
| Cca08g00399 | 110 | Gene3D | - | 10 | 102 | IPR036065 | - | |
| Cca08g00399 | 110 | PIRSF | BolA | 1 | 110 | IPR002634 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca08g00399 | Cca-Chr8 | 6085937 | 6089362 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca08g00399 | K22066 | - | gmx:100818493 | 177.948 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca08g00399 | 08 | 6085937 | 6089362 | Cca08g00399 | 08 | 6085937 | 6089362 | ECH |