Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00386 ATGGAGAGGGACCCAAACATGAGCAAAGAAATAGTGGTTTCAAATTTCACATTGCATTCCTCATCCACAAAAGGGTTCAAGGACAAGAGCATCGCCAACAATAACATGCCCTTCTGGCTCCTCAACAATATTTCTGACTTGGAGGAGAGGATGAAAGTGTTGGCAATGAGTACAACAGAAGAAGAAGAAATGGGTGACACTTTTGCAGAAAGAGCTGAATCGTACTACCAAAAGAGACCTCAACTACTGTCCCTTCTGCAGGACTTGTATAATGGCTACATAACCTTATCTGATCGTTACATTCAAACCCTGGCCAAGCACAAGCATCATCATAGTAGACACTCTTCTCAAGTCTCAACAGTAGATGAAGGCTTCTCTGATCAAGAAGAAGCTAGTGGTGTGAGCCACATTGATTCAGACATTGAAAGCTCAATCTCCTACCAACACCCTCCATCCATGATGATGCCTTTTGTCCCCCCTAGAACCTCCATGCTTGATGTCGACGCCATTGTTGCCGAGCTTGTGATTCAGAATGTCGAGTATGACGTGTTGATGCATGAGGTTGGTGTCATGGAGAGGAGGTACTGTGAGTCCTCAAGGAAAAGTGAACTTCAAAAGAGTCTGCTTGAGGTGTTGGAGTCTGAGAGGATTGTTTTGTTGAATGAGAATGCTAGCTTGAGTTATAGAGTCAACACTTTGGTGGAAGAGAACAAAGAGCTGGCATCTGAGTCAGTGTTCATTAAGAGGAAGGCTGGTGAGCTAGCAAAGTGTGTGCTGAAGATGAGGGAGGATCATAGAGTGTACATGCTACACAGGAAAATTGAAGATCTTCAGGCACAGATACATGGTTTGGAGAAGAGGAACAAGGAGTACTATGAGAAGCTTTTGAGGAGAGACGGTCAAGAAGATGGTAACAAAGGGAAGAGTGGTGAGGGGATTGCTTTGGAAGTGTGTGTTCAGATGGACAAGTTTAGAATGTTCAAGTGGAAAGATGGAAGCTCTTCAGGGAAGAAATTTGGTGGGAAGAAGGCCCCAAGTTTGTGGAAAAAGCTGAAGAACATGGATTTGTTATTGTGTGGAACTAATCCAACCTGTGCTTGA 1101 0.4396 MERDPNMSKEIVVSNFTLHSSSTKGFKDKSIANNNMPFWLLNNISDLEERMKVLAMSTTEEEEMGDTFAERAESYYQKRPQLLSLLQDLYNGYITLSDRYIQTLAKHKHHHSRHSSQVSTVDEGFSDQEEASGVSHIDSDIESSISYQHPPSMMMPFVPPRTSMLDVDAIVAELVIQNVEYDVLMHEVGVMERRYCESSRKSELQKSLLEVLESERIVLLNENASLSYRVNTLVEENKELASESVFIKRKAGELAKCVLKMREDHRVYMLHRKIEDLQAQIHGLEKRNKEYYEKLLRRDGQEDGNKGKSGEGIALEVCVQMDKFRMFKWKDGSSSGKKFGGKKAPSLWKKLKNMDLLLCGTNPTCA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00386 366 PANTHER KINASE-INTERACTING FAMILY PROTEIN 30 364 - -
Cca08g00386 366 Pfam KIP1-like protein 38 100 IPR011684 GO:0003779
Cca08g00386 366 PANTHER PROTEIN NETWORKED 4A 30 364 - -
Cca08g00386 366 Coils Coil 267 294 - -
Cca08g00386 366 MobiDBLite consensus disorder prediction 111 140 - -
Cca08g00386 366 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 19 107 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00386 Cca-Chr8 5971859 5977184 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00386 - - gmx:100776808 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00386 08 5971859 5977184 Cca08g00386 08 5971859 5977184 ECH