Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00384 ATGAAGGACACCACCGCCGGCGCCGCTGCGGAGAACGCTGCCGGCGGCGGCAATAGGGCACGGAGTTCCTTTAGCCACCGTTTGGGGAGAAGGGTCATGCAAGTCGGCATGTTGCTTGTTGTGTTTGGTGTGTTGTGGATGTTCCTATATAATTCTACCTCTTTCTTTGGATTTCCTTCCTTCTCACATTATTACTTCATTGATGAGTCACCAAAGGCTGATTGTGAATCAAGGCTAGAGGGTGTTCTTAGAAACGCATCTATGAAGGATAAGACAGTGATAATCACAACTTTAAATGATGCATGGGCTGAGCCAGGTTCCATATTTGACCTCTTTCTTGAGAGTTTTCAGATAGGAATCCAAACACAAAAGCTTTTAAATCATTTGGTGGTATTAACTTGGGACCAAAAAGCACATGCTCGTTGCCTTGCTTTGCACAAACATTGTCACCAACTTGAAACTAAAAGTGATGACAATTTCACCGGTGAAGTATTTTTCATGACCCCAAACTACCTACACATGATGTGGACAAGAACTAAATTACTTGGTTCTATCCTTGATATGGGATACAACTTTGTGTTCACGGATACTGATATAATGTGGCTTAGAGATCCCTTCAAAGAGTTTTACAAAGATGCTGATTTCCAAATAGCATGTGATTATTTCAATGGCAATTCCCATGACTTAAAAAACCTTCCAAATGGAGGGTTTAAATATGTGAAATCGAATAACCGATCTATTTGGTTCTACAAGTTTTGGTTCAACTCTAGGAATGTTGACCCAAGGTTGAATGAGCAAGATGTGTTCAACAATATCAAAACGAACCCTTTAGTTTCCAACATGAAGCTAAAGATTAGGTTCCTTAGCACTAGCTATTTTGGAGGGTTTTGTGAGGCTAGCAAGGACCTCAAGAAGGTCTCAACAATGCATGCCAATTGTTGTGTTGGTTTAGAAAATAAAGTCAATGATCTCAAAATTTTGCTTGAGGATTGGAAGAAGTATGTAGCATTGTCTGAAAATGAGAAAAAACAGTCACATCTTTCTTGGAGCGTACCACAAAGTTGCAGGACGTCCTTTCAACGTGCCAAACAAAGGAAGGAAAACTAA 1107 0.4038 MKDTTAGAAAENAAGGGNRARSSFSHRLGRRVMQVGMLLVVFGVLWMFLYNSTSFFGFPSFSHYYFIDESPKADCESRLEGVLRNASMKDKTVIITTLNDAWAEPGSIFDLFLESFQIGIQTQKLLNHLVVLTWDQKAHARCLALHKHCHQLETKSDDNFTGEVFFMTPNYLHMMWTRTKLLGSILDMGYNFVFTDTDIMWLRDPFKEFYKDADFQIACDYFNGNSHDLKNLPNGGFKYVKSNNRSIWFYKFWFNSRNVDPRLNEQDVFNNIKTNPLVSNMKLKIRFLSTSYFGGFCEASKDLKKVSTMHANCCVGLENKVNDLKILLEDWKKYVALSENEKKQSHLSWSVPQSCRTSFQRAKQRKEN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00384 368 PANTHER EXPRESSED PROTEIN-RELATED 4 360 IPR044821 -
Cca08g00384 368 PANTHER NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN 4 360 - -
Cca08g00384 368 Pfam Nucleotide-diphospho-sugar transferase 125 324 IPR005069 -
Cca08g00384 368 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00384 Cca-Chr8 5938460 5943713 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00384 - - gmx:100778213 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00384 08 5938460 5943713 Cca08g00384 08 5938460 5943713 ECH