Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00383 ATGAAGGACCCCTCCGCCGGCGCTGCCGTGGATACCGCCGCCGGCAGCCACCTTTTGGTGAGAAGGACCATGCTAGTCACCACCATGTTCCTTGTTGGGTTTGGTGTGTTGTGGGTGTTTCTCTATAACTCTGCCTCTCCCTTTGGATTCTCTTCCTTCTCACATGACTTCATTCATGAGTCATCAAAAGCTGATTTTGATCCAATGCTAGAGAGTGTTCTCAGGAGCGCGTCTATGAAGGATAAGACAGTGATACTCACAACTTTAAATGATGCATGGGCTGAGCCAGGTTCCATATTTGACCTCTTTCTTGAGAGTTTTCGGCTAGGAATCCAAACACAAAAGCTTTTAAATCACTTGGTGGTAATAACATTGGACCAAAAGGCACATGCTCGTTGCCTTGCTTTGAACAAGCATTGTTACCAACTTGAAACTAAGGGTGACAATTTCACCGGTGAAGCATTTTTCATGACCCCAGATTACCTACACATGATGTGGAGAAGAATTGAATTCCTTGGTTGGGTCCTTGATATGGGGTACAACTTTGTGTTCACGGATACTGATATAATGTGGCTTAGAAATCCCTTCAAACAATTTTACAAAGATGCAGATTTCCAAATAGCTTGTGATTTTTTCAATGGCAATTCCTTTGACTTAAACAACCTACCAAATGGAGGGTTTAATTATGTGAAATCGAATAAGCGAACTATTTGGTTCTACAAGTTCTGGTTACGCTCTAGGAGTTCCTATCCAAAAATGCATGATCAAGATGTGCTCAACAAGATCAAAAAGCACCCTTTCATTTCTGACATGGAGCTAAAGATCAGATTCCTTAGCACTGGTTATTTTGGAGGGTTCTGTCAGGCTAGCAAGGACTTTAACAAGGTTTCCACAATGCATGCCAATTGTTGTGTTGGTTTAAACAACAAGGTCAATGATCTTAAAATTTTGCTTGAAGATTGGAAGAAGTATATGTCATTGTCTGAAAATGAGAAAAAACAGTCACATCCATCTTGGAGCGTACCACAAAGTTGCAGGACGTCATTTCAACGTGCCAAACAATGGAAGAAGAATAAAGGGGGGTTGTGA 1089 0.416 MKDPSAGAAVDTAAGSHLLVRRTMLVTTMFLVGFGVLWVFLYNSASPFGFSSFSHDFIHESSKADFDPMLESVLRSASMKDKTVILTTLNDAWAEPGSIFDLFLESFRLGIQTQKLLNHLVVITLDQKAHARCLALNKHCYQLETKGDNFTGEAFFMTPDYLHMMWRRIEFLGWVLDMGYNFVFTDTDIMWLRNPFKQFYKDADFQIACDFFNGNSFDLNNLPNGGFNYVKSNKRTIWFYKFWLRSRSSYPKMHDQDVLNKIKKHPFISDMELKIRFLSTGYFGGFCQASKDFNKVSTMHANCCVGLNNKVNDLKILLEDWKKYMSLSENEKKQSHPSWSVPQSCRTSFQRAKQWKKNKGGL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00383 362 MobiDBLite consensus disorder prediction 334 351 - -
Cca08g00383 362 MobiDBLite consensus disorder prediction 334 362 - -
Cca08g00383 362 Pfam Nucleotide-diphospho-sugar transferase 116 314 IPR005069 -
Cca08g00383 362 PANTHER NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN 13 352 - -
Cca08g00383 362 PANTHER EXPRESSED PROTEIN-RELATED 13 352 IPR044821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00383 Cca-Chr8 5910334 5917863 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00383 - - gmx:100778213 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00383 08 5910334 5917863 Cca08g00383 08 5910334 5917863 ECH