Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00382 ATGAACTTAGGTTACCAAGTGTTTGATAGTGGGTTTATGCATCAGGCTGATCATGATCCAAAGCTAAAGAGTGTTCTCAAAAGCGCGTCTATGAATAATAAGACGGTGATAATCACAACTTTAAATGGTGCATGGGCTGAGCCAGGATACATATTTGACCTCTTTCTTGAGAGTTTTCAACTAGGAATCCAAACACAAAAACTTTTAAATCACTTGGTGGTAATAACATTGGACCAAAAGGCACATGCTCGTTGCCTTGCTTTGAACAAGCATTGTTACCAACTTGAAACTAAGGGTGACAATTTCACAAGTGAAGCATTTTTCATGACCCCAAAATACCTACACATGATGTGGAGAAGAACTGAATTCCTTGGTTCTGTCCTTGAAATGGGGTACAACTTTGTGTTCACGGATACTGATATAATGTGGTTTAGAAATCCCTTCAAGCAATTTCACAAAGATGCAGATTTTCAAATAGCTTGCGATTCTTTTAATGGCAAATCCTATGACTTAAACAACCGGGCAAATGGAGGGTTTAAATATGTGAAATCAAATAAACGAACTATTTGGTTCTACAAGTTCTGGTTCAACTCTAGGAATGCCTACCCAAAATCGCATGATCAAGATGTGTTCGACAAGATCAAAAAGCACCCATTCATTTCCAACATGAAGTTGAAAATTAGGTTCCTTAGCACTAGTTATTTTGGAGGATTTTGTCAGCCTAGCAAGGACCTTAACAAGGTTTCAACAATGCATGCCAATTGTTGTGTTGGTTTAAACAACAAGGTCAATAATCTTATTATGTTGCTTAAAGATTGGAAGAAGTATATGGCATTGTCTGAAAATGAGAAAAAACAGTCGCATCTTTCTTGGAGCGTTCCACAAAATTGTTGGGATTAA 900 0.3722 MNLGYQVFDSGFMHQADHDPKLKSVLKSASMNNKTVIITTLNGAWAEPGYIFDLFLESFQLGIQTQKLLNHLVVITLDQKAHARCLALNKHCYQLETKGDNFTSEAFFMTPKYLHMMWRRTEFLGSVLEMGYNFVFTDTDIMWFRNPFKQFHKDADFQIACDSFNGKSYDLNNRANGGFKYVKSNKRTIWFYKFWFNSRNAYPKSHDQDVFDKIKKHPFISNMKLKIRFLSTSYFGGFCQPSKDLNKVSTMHANCCVGLNNKVNNLIMLLKDWKKYMALSENEKKQSHLSWSVPQNCWD 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00382 299 Pfam Nucleotide-diphospho-sugar transferase 68 266 IPR005069 -
Cca08g00382 299 PANTHER EXPRESSED PROTEIN-RELATED 12 298 IPR044821 -
Cca08g00382 299 PANTHER NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN 12 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00382 Cca-Chr8 5862119 5863854 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00382 - - gmx:100778213 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00382 08 5862119 5863854 Cca08g00382 08 5862119 5863854 ECH