Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00308 ATGACTTTTGGATTGGTTCAACTTGGAAGAAGACGACGTGGTGTCTGGTCAGTGACTTCGAAAAACGTCACAATTCAGAATCGCCGTTTCGCTGATGGTGTTTTCTGTGCTTTCAAACTGAGAGTGAGTTCAATCTCCCTAAGAAAGTCTCCAAGGTGTGAATTCGCGGTAATTGTTCGCAACAGGAATATTCCAAGTTCCTTAATGGAGAGTTCTGAAGAGGAGAATGAAGGAGTCTCTGGTAATCATGTTCCTAAGGAACTGCGTCCTTTAGCATCTGATGGTGTGAAATTTATAGATGAAGTACTCGATGGTCAAAATGAACGTTGTCTAGAGAAGTTCCGCATGGATAAGCATGTATTCTACAAATTGTGTGATATACTGCAAGCCAAGGGTTTATTGCGTCACACAAATCGAGTCAAAATTgaggagcaactggccatatttatgttcattattgggcataatctacggacaagagctgttcaagagttatttcacttatctggagaaaccattagccgtcactttaacaatgttttgaatgctataatgtcaatttcactagatttctttcagcctcctggccctggtgttccttcagaaatatttgaagattctagattctatccatattttaaagattgtgtgggagcaattgatggtatacatgtaccagttactgttggtgtagatgagcaaggacctttccgcaataagaatggtttactttcacagaatattctggcagcttgctcatttgacctcaagttccattatgttttggctggatgggaaggatctgctacagacttacaaatttttaattcagcaatcacaagggggaataaattgcacgtacctgaaggtaaatactacatagtagacagcaagtatccaaatgtgccaggtttcgttgccccatattcaagtactccctactactccaaggaatttcccaacgattaccacccacaaaatgcaactgaactgttcaatcaacgacactcattattaagaaatgtcactgatagaacttttggggccttaaaggcacgattccctatattgatgtctgctccatcttacccattacaaacacaagtgaagttagtggtggcagcatgtgtattacacaattacatTCGCAGGGAGAAACCAGATGATTGGATTTTCAAGATGTATGAAAACGCCTCATTTCCAATGGAGGAATCACAACCCCCACTAGAGATGGAAGTACCACCAAAGATGAATGTGGAGACCCAGACCCAGTCATCAGATCACACTTTTGATGCTGAAGAGATTGCATTTGCTTCACAGTTAAGGGACTCCATTACTACTGAAATGTGGAATGATTTTATCAATGATTTTGGCCGCATGTAA 1383 0.1996 MTFGLVQLGRRRRGVWSVTSKNVTIQNRRFADGVFCAFKLRVSSISLRKSPRCEFAVIVRNRNIPSSLMESSEEENEGVSGNHVPKELRPLASDGVKFIDEVLDGQNERCLEKFRMDKHVFYKLCDILQAKGLLRHTNRVKIEEQLAIFMFIIGHNLRTRAVQELFHLSGETISRHFNNVLNAIMSISLDFFQPPGPGVPSEIFEDSRFYPYFKDCVGAIDGIHVPVTVGVDEQGPFRNKNGLLSQNILAACSFDLKFHYVLAGWEGSATDLQIFNSAITRGNKLHVPEGKYYIVDSKYPNVPGFVAPYSSTPYYSKEFPNDYHPQNATELFNQRHSLLRNVTDRTFGALKARFPILMSAPSYPLQTQVKLVVAACVLHNYIRREKPDDWIFKMYENASFPMEESQPPLEMEVPPKMNVETQTQSSDHTFDAEEIAFASQLRDSITTEMWNDFINDFGRM 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00308 460 Pfam DDE superfamily endonuclease 220 380 IPR027806 -
Cca08g00308 460 PANTHER UNCHARACTERIZED 55 459 IPR045249 -
Cca08g00308 460 PANTHER NUCLEASE HARBI1-LIKE PROTEIN 55 459 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00308 - - gmx:100779133 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00308 08 4561091 4566225 Cca08g00308 08 4561091 4566225 ECH